| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.151 | NC-002333.4 | -0.111 |
| h1m | 0.142 | si:ch211-222l21.1 | -0.110 |
| ccna1 | 0.138 | si:ch73-1a9.3 | -0.105 |
| rcor1 | 0.133 | hspb1 | -0.098 |
| zgc:173742 | 0.131 | hnrnpa0b | -0.094 |
| mkrn4 | 0.129 | eef1a1l1 | -0.093 |
| zgc:100951 | 0.127 | hmga1a | -0.092 |
| zgc:56676 | 0.127 | ptmab | -0.088 |
| h2af1al | 0.126 | dynll1 | -0.084 |
| acp5a | 0.123 | si:ch211-152c2.3 | -0.082 |
| cldnd | 0.123 | hmgn6 | -0.080 |
| spink2.1 | 0.123 | rplp1 | -0.080 |
| lamp2 | 0.121 | nop2 | -0.079 |
| rbm7 | 0.120 | rps12 | -0.076 |
| gtf2a1 | 0.120 | hmgb2a | -0.074 |
| dnajc1 | 0.117 | rps6 | -0.072 |
| gdf3 | 0.115 | anp32e | -0.071 |
| zgc:77118 | 0.115 | marcksl1b | -0.071 |
| npc2 | 0.114 | rps4x | -0.071 |
| dctpp1 | 0.114 | apoc1 | -0.070 |
| si:ch211-214j24.10 | 0.113 | rps15a | -0.070 |
| ska2 | 0.113 | rpl7a | -0.069 |
| slc16a3 | 0.111 | si:dkey-56m19.5 | -0.069 |
| ctsla | 0.111 | cdx4 | -0.068 |
| blf | 0.110 | apoeb | -0.065 |
| zgc:113424 | 0.110 | rpl26 | -0.064 |
| sugt1 | 0.110 | si:ch211-137a8.4 | -0.064 |
| pfn2 | 0.108 | ewsr1a | -0.063 |
| rbpms2b | 0.107 | polr3gla | -0.062 |
| cdca7a | 0.107 | npm1a | -0.061 |
| thy1 | 0.106 | ybx1 | -0.061 |
| rp2 | 0.102 | sox2 | -0.061 |
| rac1a | 0.102 | rps7 | -0.061 |
| wee2 | 0.101 | sp5l | -0.060 |
| rab32a | 0.101 | add3b | -0.059 |