Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| atoh7 | 0.167 | h2afx1 | -0.071 |
| si:dkey-21o19.2 | 0.138 | ldhba | -0.068 |
| cdkn1cb | 0.128 | fxyd6l | -0.062 |
| fkbp1ab | 0.119 | tpi1b | -0.054 |
| prdm1a | 0.118 | cspg5a | -0.054 |
| XLOC-014477 | 0.117 | mdh1aa | -0.052 |
| prdm1b | 0.113 | ndrg4 | -0.052 |
| fabp7a | 0.108 | id1 | -0.050 |
| si:ch73-28h20.1 | 0.106 | mdkb | -0.050 |
| sox11b | 0.104 | si:dkey-16p21.8 | -0.050 |
| RASSF5 | 0.103 | id2a | -0.050 |
| hmgn2 | 0.102 | gng13b | -0.049 |
| nr2e3 | 0.096 | pcbp3 | -0.048 |
| hmga1a | 0.094 | ywhaqa | -0.047 |
| dscamb | 0.093 | snap25b | -0.046 |
| btg1 | 0.093 | gnao1b | -0.046 |
| tp53inp2 | 0.087 | calb2b | -0.046 |
| smad7 | 0.086 | her6 | -0.045 |
| hmgb2b | 0.084 | ywhaqb | -0.045 |
| msi1 | 0.083 | vsx2 | -0.044 |
| insm1a | 0.082 | gnb3a | -0.044 |
| LOC100537384 | 0.081 | atp6v1e1b | -0.043 |
| pde6gb | 0.080 | eno1a | -0.043 |
| im:7152348 | 0.080 | gpm6aa | -0.042 |
| h2afvb | 0.080 | olfm1b | -0.042 |
| zbtb18 | 0.079 | sypb | -0.042 |
| gngt2a | 0.078 | zfp36l1a | -0.042 |
| cxcr4b | 0.078 | rorab | -0.042 |
| hmgb2a | 0.077 | sox2 | -0.042 |
| ebf2 | 0.077 | gnb5b | -0.041 |
| dnmbp | 0.077 | lin7a | -0.041 |
| aplnrb | 0.077 | gng3 | -0.041 |
| stmn1a | 0.075 | lasp1 | -0.041 |
| inhbb | 0.075 | tox | -0.040 |
| kif19 | 0.075 | cplx4a | -0.040 |