Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tal1 | 0.298 | id1 | -0.061 |
| gata3 | 0.206 | sparc | -0.050 |
| gata2a | 0.192 | cldn5a | -0.049 |
| si:ch211-237l4.6 | 0.149 | notch3 | -0.045 |
| zfpm1 | 0.136 | mdka | -0.043 |
| tal2 | 0.117 | her12 | -0.041 |
| scg2a | 0.113 | gpm6bb | -0.039 |
| gad1b | 0.104 | sox19a | -0.039 |
| march4 | 0.100 | gfap | -0.038 |
| zfpm2b | 0.099 | cd82a | -0.038 |
| CT009596.1 | 0.097 | sdc4 | -0.038 |
| pkd1l2a | 0.096 | fabp7a | -0.038 |
| nkx1.2lb | 0.091 | pcna | -0.037 |
| sox1a | 0.089 | COX7A2 (1 of many) | -0.037 |
| pkd2l1 | 0.087 | sb:cb81 | -0.036 |
| kcnj2b | 0.085 | atp1a1b | -0.036 |
| myo3b | 0.082 | XLOC-003690 | -0.036 |
| tac3a | 0.082 | mdkb | -0.036 |
| c2cd4a | 0.081 | her4.1 | -0.036 |
| si:dkey-58f10.11 | 0.081 | her2 | -0.035 |
| sst1.1 | 0.081 | cd63 | -0.034 |
| rap1gap | 0.078 | zgc:165461 | -0.034 |
| nppc | 0.077 | vamp3 | -0.034 |
| scg3 | 0.076 | tuba8l | -0.033 |
| si:dkey-51d8.1 | 0.075 | msi1 | -0.033 |
| si:ch211-197g15.8 | 0.074 | pgrmc1 | -0.033 |
| svilb | 0.074 | wls | -0.033 |
| tcf21 | 0.072 | tuba8l4 | -0.033 |
| egr4 | 0.071 | zfp36l1a | -0.032 |
| vgf | 0.070 | atp1b4 | -0.031 |
| si:dkey-63b1.1 | 0.069 | si:ch211-286b5.5 | -0.031 |
| kif5c | 0.069 | tpm4a | -0.031 |
| BX649312.1 | 0.068 | sox2 | -0.031 |
| celf3a | 0.067 | her8a | -0.031 |
| sema4aa | 0.067 | nutf2l | -0.031 |