see annotation note
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cbln8 | 0.855 | rps21 | -0.069 |
| ackr4a | 0.630 | rps27.1 | -0.066 |
| fndc1 | 0.584 | rps14 | -0.064 |
| b3gnt3.1 | 0.546 | rpl19 | -0.063 |
| prox1b | 0.329 | rpl10 | -0.061 |
| tank | 0.318 | rpl13 | -0.058 |
| aatkb | 0.284 | rpl31 | -0.058 |
| rassf7a | 0.284 | rps20 | -0.057 |
| yrk | 0.283 | rps15 | -0.056 |
| kcnq5a | 0.282 | rpl14 | -0.055 |
| noxred1 | 0.271 | rpl17 | -0.052 |
| BX769173.2 | 0.266 | btf3 | -0.052 |
| LOC100333572 | 0.262 | rps13 | -0.051 |
| arhgap36 | 0.252 | rps26 | -0.051 |
| stim1b | 0.240 | rps12 | -0.051 |
| pgbd5 | 0.239 | rpl27 | -0.050 |
| or137-7 | 0.235 | rpl36 | -0.049 |
| srpx | 0.228 | rpl10a | -0.049 |
| si:dkey-9l20.3 | 0.224 | atp5mc3b | -0.047 |
| si:dkey-27p18.3 | 0.222 | rpl30 | -0.047 |
| gfi1ab | 0.215 | rack1 | -0.047 |
| sytl5 | 0.211 | rpl18 | -0.046 |
| smpd2b | 0.210 | h3f3c | -0.045 |
| CT990625.1 | 0.207 | rps3 | -0.040 |
| areg | 0.204 | atp5l | -0.039 |
| usp45 | 0.204 | rps27.2 | -0.038 |
| zgc:165603 | 0.197 | eef2b | -0.038 |
| angptl7 | 0.192 | pabpc1a | -0.038 |
| tanc1b | 0.189 | fkbp1aa | -0.037 |
| twnk | 0.186 | slc25a3b | -0.037 |
| c19h1orf109 | 0.179 | cox8a | -0.037 |
| ttyh1 | 0.178 | zgc:193541 | -0.036 |
| NC-002333.11 | 0.177 | ran | -0.035 |
| si:dkey-266m15.5 | 0.174 | cirbpa | -0.035 |
| ca10a | 0.174 | hnrnpa0l | -0.034 |