see annotation note
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| FP016234.1 | 0.673 | icn | -0.168 |
| igfbp5a | 0.646 | krt91 | -0.162 |
| fthl29 | 0.640 | si:dkey-193p11.2 | -0.153 |
| slc8a1b | 0.626 | ptmab | -0.143 |
| fstb | 0.609 | hmgn3 | -0.136 |
| LOC101886621 | 0.608 | malb | -0.133 |
| trpv6 | 0.603 | si:ch73-1a9.3 | -0.129 |
| CABZ01102170.1 | 0.603 | rplp1 | -0.126 |
| fthl30 | 0.595 | rps12 | -0.124 |
| tpte | 0.589 | si:ch73-281n10.2 | -0.124 |
| pxdc1b | 0.559 | zgc:92380 | -0.122 |
| si:dkey-159a18.1 | 0.558 | rpl26 | -0.122 |
| pappaa | 0.546 | h2afva | -0.122 |
| fthl28 | 0.542 | arpp19b | -0.116 |
| CU914776.1 | 0.540 | si:dkey-151g10.6 | -0.116 |
| s100a11 | 0.536 | ahnak | -0.114 |
| slc7a7 | 0.525 | LOC799574 | -0.113 |
| igf2b | 0.521 | hmgb2a | -0.111 |
| mafbb | 0.511 | zgc:153284 | -0.111 |
| dscama | 0.511 | s100u | -0.110 |
| appb | 0.507 | ywhaz | -0.109 |
| lbh | 0.500 | rps21 | -0.108 |
| LOC103910196 | 0.491 | ssr4 | -0.105 |
| usp2a | 0.487 | zgc:110339 | -0.105 |
| vsnl1a | 0.472 | ssr3 | -0.103 |
| angptl5 | 0.470 | agr2 | -0.103 |
| si:dkey-229e3.2 | 0.455 | lgals3b | -0.103 |
| sgk2b | 0.447 | hnrnpaba | -0.101 |
| ctsl.1 | 0.445 | rplp2l | -0.101 |
| gatm | 0.444 | si:ch211-222l21.1 | -0.101 |
| XLOC-020301 | 0.442 | tubb2b | -0.098 |
| slc3a2a | 0.439 | mat2al | -0.097 |
| mtmr11 | 0.438 | h2afvb | -0.096 |
| camk2n1a | 0.430 | zgc:101744 | -0.096 |
| sgip1a | 0.425 | nipal4 | -0.096 |