| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lhx1a | 0.564 | sox3 | -0.398 |
| gata5 | 0.530 | id1 | -0.336 |
| dkk1b | 0.526 | sox19a | -0.294 |
| msgn1 | 0.513 | cxcr4b | -0.290 |
| gata6 | 0.505 | asb11 | -0.256 |
| FP102169.1 | 0.494 | zic2b | -0.255 |
| efnb2b | 0.485 | aldob | -0.252 |
| mespab | 0.480 | si:ch1073-80i24.3 | -0.246 |
| pitx2 | 0.473 | foxd5 | -0.207 |
| ism1 | 0.470 | cited4b | -0.197 |
| osr1 | 0.466 | sb:cb81 | -0.193 |
| kirrel3l | 0.437 | si:ch211-152c2.3 | -0.192 |
| efnb2a | 0.430 | polr3gla | -0.185 |
| aplnrb | 0.428 | si:ch73-1a9.3 | -0.182 |
| dusp4 | 0.421 | hmgb2a | -0.180 |
| zic2a | 0.419 | sox2 | -0.170 |
| lft2 | 0.412 | pfkfb4b | -0.169 |
| sp5a | 0.405 | si:dkey-56m19.5 | -0.168 |
| mespaa | 0.399 | atp1b1a | -0.162 |
| trib3 | 0.397 | cxcr4a | -0.150 |
| plekhn1 | 0.395 | anp32a | -0.149 |
| efna1a | 0.395 | si:ch211-222l21.1 | -0.147 |
| fscn1a | 0.390 | anp32b | -0.143 |
| snai1a | 0.375 | marcksl1b | -0.143 |
| ndr2 | 0.371 | hnrnpa0b | -0.140 |
| fgf8a | 0.368 | crabp2b | -0.130 |
| rnd1b | 0.365 | alcamb | -0.127 |
| ndr1 | 0.363 | gpd1b | -0.126 |
| frmd4ba | 0.357 | inka1a | -0.126 |
| cyp27c1 | 0.351 | mych | -0.126 |
| elovl6 | 0.350 | add3b | -0.125 |
| aplnra | 0.346 | fkbp7 | -0.124 |
| BX927327.1 | 0.346 | foxh1 | -0.121 |
| lft1 | 0.344 | mex3b | -0.114 |
| sox32 | 0.342 | her8a | -0.114 |