| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dkk1b | 0.477 | sox3 | -0.314 |
| lhx1a | 0.438 | id1 | -0.289 |
| pitx2 | 0.428 | cxcr4b | -0.231 |
| gata5 | 0.412 | sox19a | -0.220 |
| fgf8a | 0.396 | asb11 | -0.187 |
| mespab | 0.390 | zic2b | -0.173 |
| osr1 | 0.389 | foxd5 | -0.152 |
| FP102169.1 | 0.383 | sb:cb81 | -0.150 |
| ndr1 | 0.373 | aldob | -0.150 |
| gata6 | 0.368 | si:ch1073-80i24.3 | -0.149 |
| efna1a | 0.356 | cited4b | -0.149 |
| lft2 | 0.351 | inka1a | -0.131 |
| trib3 | 0.347 | cxcr4a | -0.127 |
| lft1 | 0.339 | si:ch211-152c2.3 | -0.109 |
| foxa | 0.336 | pfkfb4b | -0.107 |
| aplnrb | 0.335 | si:dkey-56m19.5 | -0.106 |
| efnb2b | 0.333 | sox2 | -0.105 |
| msgn1 | 0.332 | mych | -0.103 |
| kirrel3l | 0.329 | nnr | -0.101 |
| ism1 | 0.325 | gpd1b | -0.099 |
| ndr2 | 0.320 | shisa2a | -0.096 |
| efnb2a | 0.320 | polr3gla | -0.093 |
| zic2a | 0.320 | atp1b1a | -0.093 |
| wnt11f2 | 0.319 | hmgb2a | -0.086 |
| dusp4 | 0.317 | foxh1 | -0.084 |
| irx3a | 0.313 | si:ch211-170d8.2 | -0.083 |
| sp5a | 0.308 | anp32a | -0.083 |
| elovl6 | 0.307 | glulb | -0.083 |
| sebox | 0.295 | mex3b | -0.082 |
| tbxta | 0.290 | anp32b | -0.081 |
| BX927327.1 | 0.289 | zgc:64022 | -0.080 |
| fscn1a | 0.289 | foxd3 | -0.079 |
| cyp27c1 | 0.287 | si:ch211-173m16.2 | -0.078 |
| sox32 | 0.282 | snai2 | -0.075 |
| mespaa | 0.280 | crabp2b | -0.074 |