| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| evx2 | 0.440 | id1 | -0.104 |
| nrn1a | 0.262 | XLOC-003690 | -0.086 |
| lhx1a | 0.223 | mdka | -0.085 |
| pdzrn4 | 0.202 | fabp7a | -0.084 |
| scrt2 | 0.201 | msna | -0.084 |
| uncx | 0.196 | cldn5a | -0.082 |
| hoxa9a | 0.195 | cd82a | -0.080 |
| scrt1a | 0.175 | notch3 | -0.079 |
| lhx5 | 0.173 | vamp3 | -0.076 |
| zgc:162707 | 0.173 | sdc4 | -0.074 |
| stap2a | 0.171 | fosab | -0.074 |
| nxph3 | 0.166 | atp1a1b | -0.073 |
| zgc:153395 | 0.163 | msi1 | -0.072 |
| pax2b | 0.163 | sox2 | -0.069 |
| skor1a | 0.160 | COX7A2 (1 of many) | -0.068 |
| nhlh2 | 0.157 | qki2 | -0.068 |
| dclk2a | 0.155 | sox3 | -0.068 |
| slc17a6a | 0.152 | cd81a | -0.067 |
| otpa | 0.151 | cd63 | -0.067 |
| myt1b | 0.150 | tuba8l | -0.067 |
| pak1 | 0.150 | hmgb2a | -0.066 |
| robo3 | 0.150 | gas1b | -0.065 |
| nrxn1a | 0.144 | atp1b4 | -0.063 |
| ube2ql1 | 0.144 | her2 | -0.063 |
| elavl3 | 0.140 | her12 | -0.063 |
| si:dkey-280e21.3 | 0.139 | sox19a | -0.062 |
| jagn1a | 0.138 | si:ch73-281n10.2 | -0.062 |
| MAP3K13 | 0.137 | pcna | -0.062 |
| zgc:77784 | 0.136 | dut | -0.062 |
| ebf2 | 0.135 | stmn1a | -0.062 |
| hoxb9a | 0.135 | psat1 | -0.062 |
| olig4 | 0.134 | sparc | -0.061 |
| lima1a | 0.133 | si:ch211-251b21.1 | -0.061 |
| uncx4.1 | 0.132 | gpm6bb | -0.060 |
| enc3 | 0.127 | akap12b | -0.060 |