| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dlx3b | 0.606 | cthrc1a | -0.142 |
| dlx4b | 0.581 | akap12b | -0.126 |
| dlx5a | 0.575 | tnn | -0.110 |
| dlx6a | 0.437 | ca6 | -0.105 |
| dlx1a | 0.349 | pcolcea | -0.104 |
| shox | 0.343 | cnmd | -0.103 |
| dlx2a | 0.297 | col11a1a | -0.102 |
| CU929240.1 | 0.284 | ccl25b | -0.101 |
| fgfbp2a | 0.265 | fstl1a | -0.098 |
| mab21l2 | 0.237 | si:ch211-251b21.1 | -0.096 |
| msx1a | 0.233 | bambia | -0.094 |
| ptgdsb.2 | 0.228 | marcksl1b | -0.093 |
| ecrg4a | 0.224 | tfpia | -0.092 |
| spon2b | 0.223 | raraa | -0.091 |
| grem2b | 0.221 | emilin1a | -0.091 |
| hapln1a | 0.214 | rpz5 | -0.090 |
| barx1 | 0.205 | si:dkey-56m19.5 | -0.089 |
| nr2f1b | 0.184 | tbx15 | -0.088 |
| epha4b | 0.183 | matn4 | -0.087 |
| emx2 | 0.174 | ebf3a | -0.086 |
| cxxc4 | 0.160 | alx1 | -0.084 |
| ahcy | 0.160 | tuba8l2 | -0.084 |
| postna | 0.149 | postnb | -0.083 |
| ptx3a | 0.148 | CABZ01072614.1 | -0.082 |
| cdh6 | 0.147 | bmp4 | -0.082 |
| si:dkey-12l12.1 | 0.144 | pitx2 | -0.081 |
| mab21l1 | 0.144 | tmem88b | -0.081 |
| ptgdsb.1 | 0.142 | pbx1b | -0.080 |
| sult6b1 | 0.142 | meis2b | -0.079 |
| nkx3.2 | 0.142 | cavin2b | -0.079 |
| sept5a | 0.141 | ftr82 | -0.078 |
| twist2 | 0.137 | crabp1b | -0.078 |
| pcdh18a | 0.136 | otos | -0.078 |
| si:dkey-16p21.8 | 0.134 | fxyd1 | -0.078 |
| nfic | 0.133 | col2a1a | -0.078 |