| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col9a3 | 0.337 | fabp3 | -0.128 |
| col9a1a | 0.330 | stmn1a | -0.122 |
| col9a2 | 0.326 | hmga1a | -0.103 |
| cnmd | 0.325 | apex1 | -0.099 |
| col2a1a | 0.310 | dut | -0.090 |
| col2a1b | 0.287 | mycn | -0.087 |
| col11a1a | 0.285 | tuba1a | -0.084 |
| matn4 | 0.281 | hmgb2b | -0.084 |
| fgfbp2b | 0.280 | mcm7 | -0.083 |
| epyc | 0.275 | tfap2a | -0.083 |
| col11a2 | 0.271 | pitx3 | -0.082 |
| matn1 | 0.251 | tmsb4x | -0.082 |
| cthrc1a | 0.235 | pax7a | -0.081 |
| tgfbi | 0.228 | rbbp4 | -0.080 |
| wisp3 | 0.225 | fgl1 | -0.079 |
| mia | 0.225 | nova2 | -0.077 |
| ucmab | 0.221 | grem2b | -0.076 |
| si:dkey-6n6.1 | 0.221 | marcksb | -0.075 |
| cd63 | 0.218 | si:ch211-222l21.1 | -0.075 |
| otos | 0.216 | hmgb3b | -0.075 |
| VIT | 0.213 | pcna | -0.075 |
| rcn3 | 0.213 | hmgb1b | -0.074 |
| sox9a | 0.212 | snrpe | -0.074 |
| sparc | 0.211 | ptmab | -0.073 |
| kdelr3 | 0.210 | pcbd1 | -0.073 |
| srpx | 0.209 | cbx3a | -0.073 |
| ckap4 | 0.209 | cirbpa | -0.072 |
| snorc | 0.207 | elavl3 | -0.071 |
| trabd2a | 0.206 | slc38a3a | -0.071 |
| fkbp14 | 0.201 | snrpd1 | -0.070 |
| pcolceb | 0.194 | tkta | -0.070 |
| foxc1b | 0.193 | glula | -0.070 |
| CYTL1 | 0.189 | rcc2 | -0.070 |
| acana | 0.189 | pitx2 | -0.069 |
| ssr4 | 0.188 | si:ch211-137a8.4 | -0.069 |