| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sox3 | 0.101 | osr1 | -0.074 |
| cited4b | 0.089 | foxa | -0.073 |
| fth1a | 0.086 | msgn1 | -0.072 |
| h3f3d | 0.084 | lhx1a | -0.070 |
| foxd5 | 0.077 | efnb2b | -0.068 |
| mex3b | 0.073 | im:7138239 | -0.066 |
| h2afx | 0.070 | gata5 | -0.065 |
| hnrnpabb | 0.070 | tbxta | -0.065 |
| pfkfb4b | 0.067 | kirrel3l | -0.063 |
| cxcr4a | 0.067 | aldh1a2 | -0.063 |
| ubc | 0.066 | mespab | -0.063 |
| cdca7a | 0.065 | dkk1b | -0.062 |
| noto | 0.064 | sebox | -0.062 |
| shisa2a | 0.064 | FP102169.1 | -0.060 |
| ddx5 | 0.063 | sp5a | -0.060 |
| id1 | 0.063 | zswim5 | -0.059 |
| fthl27 | 0.063 | gata6 | -0.059 |
| h2afva | 0.063 | apoc1 | -0.058 |
| hmgb2b | 0.063 | fgf3 | -0.057 |
| sox19a | 0.062 | fgf8a | -0.055 |
| h2afx1 | 0.061 | ndr2 | -0.055 |
| actb1 | 0.061 | aplnrb | -0.053 |
| sox2 | 0.061 | CR847953.1 | -0.053 |
| glulb | 0.061 | ism1 | -0.053 |
| rbm8a | 0.061 | wu:fb97g03 | -0.053 |
| marcksl1b | 0.061 | efnb2a | -0.051 |
| vox | 0.059 | NC-002333.4 | -0.051 |
| ubb | 0.058 | irx3a | -0.051 |
| chrd | 0.058 | pitx2 | -0.050 |
| ucp2 | 0.057 | nckap5l | -0.050 |
| cxcr4b | 0.057 | cyp27c1 | -0.049 |
| hmgb1a | 0.056 | eve1 | -0.048 |
| alcamb | 0.055 | efna1a | -0.048 |
| her8a | 0.055 | sox32 | -0.048 |
| si:ch1073-80i24.3 | 0.054 | wnt5b | -0.047 |