| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dlx4a | 0.284 | cthrc1a | -0.053 |
| dlx5a | 0.256 | akap12b | -0.051 |
| dlx4b | 0.249 | tnn | -0.044 |
| dlx3b | 0.243 | ca6 | -0.041 |
| dlx6a | 0.181 | fstl1a | -0.039 |
| dlx1a | 0.141 | ccl25b | -0.038 |
| dlx2a | 0.136 | tfpia | -0.036 |
| ptgdsb.2 | 0.127 | tbx15 | -0.036 |
| fgfbp2a | 0.103 | bmp4 | -0.036 |
| nkx3.2 | 0.103 | tmem88b | -0.035 |
| spon2b | 0.103 | si:ch211-251b21.1 | -0.035 |
| shox | 0.102 | raraa | -0.034 |
| msx1a | 0.100 | ebf3a | -0.033 |
| barx1 | 0.097 | si:dkey-238c7.16 | -0.033 |
| mab21l2 | 0.090 | postnb | -0.033 |
| cxxc4 | 0.085 | tuba8l2 | -0.032 |
| ptgdsb.1 | 0.084 | pcolcea | -0.032 |
| arxa | 0.082 | pitx2 | -0.032 |
| v2ra17 | 0.079 | kitlga | -0.031 |
| postna | 0.079 | gstt1a | -0.031 |
| ecrg4a | 0.079 | crabp1b | -0.031 |
| hapln1a | 0.074 | alx1 | -0.030 |
| pcdh18a | 0.073 | rpz5 | -0.030 |
| epha4b | 0.073 | emilin1a | -0.030 |
| chl1a | 0.070 | hoxc3a | -0.029 |
| mab21l1 | 0.066 | nid1b | -0.029 |
| cdh6 | 0.065 | CABZ01075068.1 | -0.029 |
| sept5a | 0.065 | lin28a | -0.029 |
| dlx2b | 0.065 | meis2b | -0.029 |
| arxb | 0.063 | pbx1b | -0.029 |
| si:dkey-12l12.1 | 0.063 | ftr82 | -0.029 |
| metrnlb | 0.062 | jam2b | -0.028 |
| nfic | 0.062 | meis3 | -0.028 |
| pbx3b | 0.062 | cnmd | -0.028 |
| cald1b | 0.061 | fabp11a | -0.028 |