Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| TC2N | 0.217 | fabp3 | -0.043 |
| scospondin | 0.209 | ptmaa | -0.036 |
| XLOC-023308 | 0.193 | elavl3 | -0.033 |
| adgrg2a | 0.159 | tmsb4x | -0.030 |
| BX510941.1 | 0.155 | nova2 | -0.029 |
| arxa | 0.150 | hmgb1a | -0.029 |
| optc | 0.146 | gpm6aa | -0.028 |
| SPDEF | 0.145 | rtn1a | -0.027 |
| si:ch73-321d9.2 | 0.134 | COX3 | -0.027 |
| irx7 | 0.131 | si:dkey-56m19.5 | -0.027 |
| foxa2 | 0.129 | mt-atp6 | -0.027 |
| her11 | 0.127 | tmsb | -0.027 |
| lgals2a | 0.126 | hmgb3a | -0.027 |
| shha | 0.125 | hoxb3a | -0.027 |
| shhb | 0.121 | si:dkey-276j7.1 | -0.026 |
| arxb | 0.113 | si:ch211-137a8.4 | -0.026 |
| cxcl12b | 0.112 | myt1b | -0.026 |
| foxa1 | 0.111 | ckbb | -0.026 |
| CR450698.1 | 0.110 | meis1b | -0.025 |
| loxl5b | 0.109 | stmn1b | -0.025 |
| col9a2 | 0.109 | gpm6ab | -0.025 |
| si:ch211-163l21.7 | 0.107 | tuba1c | -0.025 |
| bicc2 | 0.106 | prdx2 | -0.024 |
| lmx1bb | 0.106 | sox3 | -0.024 |
| ntd5 | 0.105 | hoxb8a | -0.024 |
| lamb1a | 0.105 | mt-co2 | -0.023 |
| tagln2 | 0.105 | si:ch211-251b21.1 | -0.023 |
| pacrg | 0.102 | hoxb9a | -0.023 |
| aplnr2 | 0.102 | myt1a | -0.022 |
| spon1b | 0.100 | cadm3 | -0.022 |
| col8a1a | 0.100 | gnao1a | -0.022 |
| col9a1b | 0.100 | mex3b | -0.022 |
| rab36 | 0.099 | sox11b | -0.021 |
| si:ch211-226h8.11 | 0.099 | dpysl2b | -0.021 |
| spag8 | 0.099 | rplp2 | -0.021 |