Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msx1b | 0.203 | fgfbp2b | -0.065 |
| aqp3b | 0.185 | ecrg4a | -0.054 |
| fmoda | 0.180 | barx1 | -0.052 |
| adma | 0.178 | col11a2 | -0.049 |
| cdon | 0.174 | dlx5a | -0.049 |
| kitlga | 0.161 | col2a1a | -0.046 |
| ca6 | 0.158 | foxf2a | -0.044 |
| vcam1b | 0.156 | si:ch211-156j16.1 | -0.043 |
| lmx1ba | 0.156 | si:ch211-222l21.1 | -0.043 |
| msx3 | 0.154 | dlx3b | -0.042 |
| ccl44 | 0.153 | si:dkey-151g10.6 | -0.042 |
| zgc:114181 | 0.153 | dlx4a | -0.042 |
| si:ch211-69b22.5 | 0.152 | dlx2a | -0.042 |
| csf1a | 0.150 | hapln1a | -0.041 |
| lmx1bb | 0.149 | stmn1a | -0.041 |
| clec14a | 0.148 | gsc | -0.041 |
| ism1 | 0.146 | sox9a | -0.041 |
| csf1b | 0.144 | foxf1 | -0.041 |
| wnt11r | 0.142 | epyc | -0.040 |
| alx4a | 0.139 | rplp1 | -0.040 |
| ccdc80l2 | 0.137 | rplp2l | -0.040 |
| tpbga | 0.136 | matn1 | -0.040 |
| tnmd | 0.135 | otos | -0.039 |
| si:ch211-243a20.3 | 0.134 | cxcl12a | -0.038 |
| si:ch211-106j24.1 | 0.134 | dlx1a | -0.038 |
| tmem88a | 0.130 | dlx4b | -0.038 |
| tgm2b | 0.129 | wwp2 | -0.038 |
| cyr61 | 0.127 | snrpe | -0.037 |
| thbs3b | 0.126 | cxcl12b | -0.037 |
| zgc:113307 | 0.121 | hand2 | -0.037 |
| wls | 0.121 | lhx6 | -0.036 |
| olfm3b | 0.121 | rpl37 | -0.036 |
| si:dkey-56m19.5 | 0.119 | prmt1 | -0.036 |
| FQ378018.1 | 0.118 | npm1a | -0.035 |
| zic1 | 0.118 | grem2b | -0.035 |