Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fmoda | 0.189 | si:ch211-137a8.4 | -0.031 |
| ccdc80l2 | 0.150 | her15.1 | -0.028 |
| si:ch211-106j24.1 | 0.147 | XLOC-003690 | -0.027 |
| pdgfrl | 0.145 | ddx39ab | -0.026 |
| alx4a | 0.141 | hmgb3b | -0.026 |
| dcn | 0.137 | apex1 | -0.025 |
| cd248b | 0.136 | sox3 | -0.025 |
| csf1a | 0.135 | XLOC-003689 | -0.025 |
| adma | 0.133 | nova2 | -0.024 |
| lamc3 | 0.132 | snrpb | -0.024 |
| lum | 0.132 | snrpe | -0.024 |
| zgc:113307 | 0.129 | snrpd1 | -0.023 |
| mfap2 | 0.128 | XLOC-003692 | -0.023 |
| cyr61 | 0.127 | msi1 | -0.022 |
| csf1b | 0.127 | prmt1 | -0.022 |
| colec12 | 0.126 | sox11b | -0.022 |
| col5a1 | 0.123 | dla | -0.021 |
| pmp22a | 0.122 | her12 | -0.021 |
| serpinf1 | 0.122 | hes6 | -0.021 |
| ca6 | 0.121 | ilf2 | -0.021 |
| mmp14a | 0.121 | npm1a | -0.021 |
| cldn11a | 0.119 | snrpf | -0.021 |
| tnmd | 0.119 | her4.2 | -0.021 |
| cdon | 0.117 | cct4 | -0.020 |
| thbs3b | 0.116 | cycsb | -0.020 |
| tnn | 0.116 | marcksb | -0.020 |
| twist1a | 0.116 | nop10 | -0.020 |
| fstl3 | 0.115 | ptges3b | -0.020 |
| prrx1b | 0.114 | snrpg | -0.020 |
| col11a1b | 0.113 | snu13b | -0.020 |
| FQ378018.1 | 0.111 | sox19a | -0.020 |
| krt18b | 0.111 | tmpob | -0.020 |
| pcolcea | 0.109 | abhd6a | -0.020 |
| wnt11r | 0.109 | aldoaa | -0.019 |
| col1a2 | 0.108 | dkc1 | -0.019 |