Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| h1m | 0.419 | calm1a | -0.081 |
| cldnd | 0.417 | ccni | -0.073 |
| nanog | 0.416 | tuba1c | -0.073 |
| ccna1 | 0.406 | hbbe1.3 | -0.072 |
| zgc:173742 | 0.382 | rtn1a | -0.072 |
| zgc:113424 | 0.377 | gpm6aa | -0.071 |
| acp5a | 0.376 | rnasekb | -0.071 |
| si:dkey-68o6.5 | 0.374 | atp6v0cb | -0.070 |
| map1lc3c | 0.367 | gapdhs | -0.070 |
| h2af1al | 0.366 | hbae3 | -0.070 |
| cth1 | 0.364 | si:ch1073-429i10.3.1 | -0.069 |
| zgc:100951 | 0.348 | stmn1b | -0.068 |
| zgc:77118 | 0.343 | gng3 | -0.067 |
| si:dkeyp-114g9.1 | 0.342 | hbae1.1 | -0.065 |
| btg4 | 0.341 | nova2 | -0.065 |
| avd | 0.340 | gpm6ab | -0.063 |
| wee2 | 0.339 | krt4 | -0.063 |
| si:ch211-132b12.8 | 0.332 | ywhag2 | -0.063 |
| nnr | 0.331 | pvalb1 | -0.062 |
| pabpc1l | 0.331 | sncb | -0.062 |
| si:rp71-45k5.2 | 0.330 | elavl3 | -0.061 |
| pabpn1l | 0.327 | elavl4 | -0.061 |
| lsm14b | 0.323 | hbbe1.1 | -0.061 |
| larp6b | 0.320 | snap25a | -0.061 |
| si:ch73-303b9.1 | 0.318 | vamp2 | -0.061 |
| FO834825.1 | 0.317 | atp6v1e1b | -0.060 |
| gtf3ab | 0.315 | atp6v1g1 | -0.060 |
| si:dkey-208k4.2 | 0.313 | cyt1 | -0.060 |
| mcm6l | 0.305 | mdkb | -0.060 |
| LOC101885477 | 0.302 | pvalb2 | -0.060 |
| gdf3 | 0.301 | stx1b | -0.060 |
| ddx4 | 0.296 | zgc:65894 | -0.060 |
| fam113 | 0.295 | stxbp1a | -0.060 |
| si:dkey-228b2.6 | 0.292 | h2afy2 | -0.058 |
| si:ch211-145c1.1 | 0.291 | rtn1b | -0.058 |