Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| otos | 0.271 | hmga1a | -0.115 |
| epyc | 0.242 | tmsb4x | -0.109 |
| col9a1a | 0.216 | si:ch211-222l21.1 | -0.106 |
| cthrc1b | 0.215 | ptmab | -0.094 |
| col11a2 | 0.213 | hmgb2a | -0.093 |
| matn1 | 0.211 | hmgb2b | -0.091 |
| col9a3 | 0.209 | h2afvb | -0.090 |
| col9a2 | 0.206 | actb1 | -0.088 |
| tnxba | 0.205 | h3f3a | -0.087 |
| cnmd | 0.203 | cirbpa | -0.086 |
| col2a1a | 0.200 | si:ch73-1a9.3 | -0.084 |
| si:dkey-31g6.6 | 0.193 | hmgn6 | -0.081 |
| ucmab | 0.190 | hmgn2 | -0.080 |
| col11a1a | 0.180 | si:ch211-288g17.3 | -0.079 |
| wisp3 | 0.180 | tubb2b | -0.077 |
| AL929222.2 | 0.172 | snrpd1 | -0.077 |
| mia | 0.162 | seta | -0.076 |
| matn4 | 0.161 | khdrbs1a | -0.075 |
| ptgdsa | 0.157 | marcksb | -0.074 |
| fgfbp2b | 0.155 | nucks1a | -0.074 |
| prss35 | 0.154 | stmn1a | -0.073 |
| LOC100330861 | 0.151 | hmgb1b | -0.071 |
| snorc | 0.149 | snrpe | -0.069 |
| VIT | 0.147 | si:ch73-281n10.2 | -0.069 |
| col2a1b | 0.146 | snrpf | -0.069 |
| arsia | 0.145 | ddx39ab | -0.068 |
| srpx | 0.144 | hsp90ab1 | -0.068 |
| csgalnact1a | 0.137 | snrpb | -0.067 |
| trabd2a | 0.137 | hmgb3a | -0.067 |
| ecrg4a | 0.133 | tpm4a | -0.067 |
| pcolceb | 0.133 | si:dkey-261h17.1 | -0.067 |
| si:dkey-6n6.1 | 0.132 | hnrnpa0b | -0.065 |
| CLEC3A | 0.131 | sub1a | -0.065 |
| zgc:162879 | 0.130 | rbbp4 | -0.064 |
| frzb | 0.130 | dut | -0.064 |