Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| otos | 0.234 | snrpd1 | -0.051 |
| col9a1a | 0.203 | ddx39ab | -0.050 |
| matn1 | 0.189 | marcksb | -0.050 |
| tnxba | 0.187 | apex1 | -0.048 |
| cthrc1b | 0.180 | si:ch211-288g17.3 | -0.048 |
| fgfbp2b | 0.163 | snrpf | -0.048 |
| col9a3 | 0.160 | seta | -0.047 |
| cnmd | 0.158 | hmgb1b | -0.046 |
| col11a2 | 0.158 | snrpe | -0.046 |
| col9a2 | 0.155 | fabp3 | -0.045 |
| wisp3 | 0.154 | snrpb | -0.045 |
| mia | 0.151 | cbx3a | -0.043 |
| AL929222.2 | 0.150 | ilf2 | -0.042 |
| col2a1b | 0.150 | smarce1 | -0.042 |
| epyc | 0.148 | snrpg | -0.042 |
| VIT | 0.148 | her15.1 | -0.042 |
| arsia | 0.144 | hdac1 | -0.041 |
| col11a1a | 0.140 | nova2 | -0.041 |
| col2a1a | 0.140 | snrpd2 | -0.041 |
| srpx | 0.139 | tuba1a | -0.041 |
| acana | 0.138 | rbbp4 | -0.040 |
| LOC100330861 | 0.138 | h2afva | -0.039 |
| CLEC3A | 0.137 | hmgb3a | -0.039 |
| pcolceb | 0.136 | nucks1a | -0.039 |
| ucmab | 0.136 | si:ch211-137a8.4 | -0.039 |
| itih1 | 0.129 | hnrnpa0a | -0.038 |
| matn4 | 0.128 | ilf3b | -0.038 |
| ptgdsa | 0.128 | alyref | -0.037 |
| ecrg4a | 0.127 | dut | -0.037 |
| CYTL1 | 0.121 | magoh | -0.037 |
| sparc | 0.116 | setb | -0.037 |
| snorc | 0.114 | si:ch211-51e12.7 | -0.037 |
| zgc:162879 | 0.110 | tuba1c | -0.037 |
| csgalnact1a | 0.107 | ddx39aa | -0.036 |
| itga10 | 0.107 | hnrnph1l | -0.036 |