Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| SPATA1 | 0.055 | rtn1a | -0.025 |
| hoxb13a | 0.054 | tuba1c | -0.024 |
| c8h22orf15 | 0.052 | gpm6aa | -0.023 |
| hoxa13a | 0.052 | nova2 | -0.023 |
| hoxc13a | 0.052 | stmn1b | -0.023 |
| hoxc13b | 0.052 | gpm6ab | -0.022 |
| hoxd12a | 0.046 | si:dkey-276j7.1 | -0.022 |
| ccdc175 | 0.045 | atp6v0cb | -0.021 |
| evplb | 0.045 | celf2 | -0.021 |
| si:dkeyp-110a12.4 | 0.043 | ckbb | -0.021 |
| spint2 | 0.043 | elavl3 | -0.021 |
| ppl | 0.042 | hmgb3a | -0.021 |
| cd9b | 0.041 | tubb5 | -0.021 |
| epcam | 0.041 | marcksl1a | -0.021 |
| hoxb10a | 0.041 | hmgb1b | -0.020 |
| hoxd10a | 0.041 | mdkb | -0.020 |
| cldne | 0.040 | si:ch211-137a8.4 | -0.020 |
| hoxa10b | 0.040 | gng3 | -0.019 |
| oclna | 0.040 | rnasekb | -0.019 |
| scel | 0.040 | sncb | -0.019 |
| si:ch211-157c3.4 | 0.040 | cspg5a | -0.018 |
| si:ch73-204p21.2 | 0.040 | tmsb | -0.018 |
| si:dkey-87o1.2 | 0.040 | zc4h2 | -0.018 |
| anxa1a | 0.039 | hbbe1.3 | -0.017 |
| anxa1c | 0.039 | rtn1b | -0.017 |
| ccdc169 | 0.039 | si:ch211-133n4.4 | -0.017 |
| cfl1l | 0.039 | vamp2 | -0.017 |
| f11r.1 | 0.039 | atp6v1e1b | -0.016 |
| hoxd13a | 0.039 | atpv0e2 | -0.016 |
| si:ch211-250c4.5 | 0.039 | elavl4 | -0.016 |
| si:dkey-19b23.12 | 0.039 | epb41a | -0.016 |
| stard14 | 0.039 | fabp3 | -0.016 |
| wu:fb18f06 | 0.039 | fam168a | -0.016 |
| ap1s3b | 0.038 | fez1 | -0.016 |
| btr12 | 0.038 | gng2 | -0.016 |