| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her3 | 0.135 | tbx16 | -0.110 |
| sox2 | 0.110 | cth1 | -0.085 |
| pkdccb | 0.103 | ddit4 | -0.083 |
| si:ch211-152c2.3 | 0.095 | snai1a | -0.081 |
| hmgb2a | 0.095 | si:dkey-261j4.5 | -0.077 |
| sox19a | 0.086 | dnajc1 | -0.075 |
| si:ch211-222l21.1 | 0.084 | xbp1 | -0.075 |
| si:ch73-1a9.3 | 0.084 | mkrn4 | -0.073 |
| pfkfb4b | 0.084 | gtf2a1 | -0.073 |
| aldob | 0.084 | nanog | -0.071 |
| hnrnpa0b | 0.083 | tbxta | -0.068 |
| sox3 | 0.082 | osr1 | -0.066 |
| ptmab | 0.081 | rmnd5b | -0.065 |
| hmgn6 | 0.076 | cldnd | -0.065 |
| alcamb | 0.076 | foxa | -0.065 |
| si:ch211-133n4.4 | 0.075 | npc2 | -0.065 |
| pkdcca | 0.075 | trib3 | -0.064 |
| sept12 | 0.074 | lhx1a | -0.063 |
| sp5l | 0.074 | ccna1 | -0.063 |
| CU182823.2 | 0.073 | acp5a | -0.062 |
| si:dkey-73p2.1 | 0.072 | FP102169.1 | -0.062 |
| prdm14 | 0.072 | fgf8a | -0.061 |
| hspb1 | 0.071 | h2af1al | -0.061 |
| CR388148.1 | 0.071 | aif1l | -0.060 |
| rapgef4 | 0.070 | spink2.1 | -0.060 |
| atp1b1a | 0.070 | fscn1a | -0.059 |
| foxd5 | 0.068 | si:dkey-68o6.5 | -0.059 |
| sb:cb81 | 0.068 | metrnla | -0.059 |
| cyp1a | 0.068 | zfand5b | -0.058 |
| egr1 | 0.068 | larp7 | -0.058 |
| myog | 0.067 | mid1ip1l | -0.058 |
| otx2a | 0.067 | mespab | -0.058 |
| hesx1 | 0.067 | dctpp1 | -0.058 |
| lhx5 | 0.067 | slc16a3 | -0.057 |
| CR383676.1 | 0.066 | ccnb2 | -0.057 |