Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pmp22a | 0.049 | tuba1a | -0.015 |
| SCARF2 | 0.045 | tuba1c | -0.015 |
| col5a1 | 0.043 | elavl3 | -0.013 |
| fkbp14 | 0.042 | hes6 | -0.013 |
| tgfbi | 0.042 | si:ch211-137a8.4 | -0.013 |
| col2a1b | 0.041 | rtn1a | -0.012 |
| mfap2 | 0.041 | sox11b | -0.012 |
| cthrc1a | 0.040 | gpm6aa | -0.011 |
| rcn3 | 0.040 | hmgb3b | -0.011 |
| tpm4a | 0.040 | insm1a | -0.011 |
| col11a1b | 0.039 | nova2 | -0.011 |
| fstl1b | 0.039 | si:dkey-276j7.1 | -0.011 |
| reck | 0.039 | stmn1b | -0.011 |
| fmoda | 0.038 | XLOC-003692 | -0.011 |
| marveld1 | 0.038 | her15.1 | -0.011 |
| matn4 | 0.038 | cadm3 | -0.010 |
| sparc | 0.038 | cdkn2aipnl | -0.010 |
| tmem119b | 0.038 | cyt1 | -0.010 |
| col9a2 | 0.037 | epb41a | -0.010 |
| col9a3 | 0.037 | LOC798783 | -0.010 |
| fibina | 0.037 | myt1a | -0.010 |
| fkbp10b | 0.037 | sox3 | -0.010 |
| fkbp7 | 0.037 | tmsb | -0.010 |
| socs3b | 0.037 | XLOC-003689 | -0.010 |
| cnmd | 0.036 | abhd6a | -0.010 |
| CU929237.1 | 0.036 | apex1 | -0.009 |
| fkbp9 | 0.036 | cfl1l | -0.009 |
| lpar1 | 0.036 | dla | -0.009 |
| mmp2 | 0.036 | dlb | -0.009 |
| srpx | 0.036 | elovl4a | -0.009 |
| twist1a | 0.036 | epcam | -0.009 |
| col2a1a | 0.035 | gadd45gb.1 | -0.009 |
| pdgfra | 0.035 | her12 | -0.009 |
| prrx1a | 0.035 | hmgb1b | -0.009 |
| serpinf1 | 0.035 | krt4 | -0.009 |