Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hmx4 | 0.280 | cldnb | -0.057 |
| foxe3 | 0.246 | fabp3 | -0.056 |
| hmx1 | 0.203 | nme2b.1 | -0.053 |
| gyg1b | 0.176 | ociad2 | -0.050 |
| pax6b | 0.173 | jun | -0.049 |
| oct2 | 0.172 | klf3 | -0.048 |
| six3b | 0.167 | rhbg | -0.047 |
| mab21l2 | 0.163 | sesn1 | -0.044 |
| pax6a | 0.159 | spint2 | -0.044 |
| tkta | 0.158 | crip1 | -0.043 |
| si:dkey-30c15.2 | 0.145 | cldne | -0.042 |
| bgnb | 0.144 | krt15 | -0.041 |
| si:dkey-164f24.2 | 0.139 | cldn7b | -0.041 |
| six3a | 0.129 | fmodb | -0.040 |
| LOC103912066 | 0.119 | postna | -0.040 |
| prdm12a | 0.112 | apoc1 | -0.040 |
| CR376779.1 | 0.109 | ucp2 | -0.040 |
| esm1 | 0.109 | zgc:77439 | -0.039 |
| BX323035.1 | 0.107 | cfd | -0.039 |
| tnn | 0.107 | elf3 | -0.038 |
| slc22a13b | 0.105 | fxyd1 | -0.038 |
| bcl2l13 | 0.092 | rarga | -0.038 |
| prox1a | 0.092 | tbx1 | -0.038 |
| kera | 0.090 | si:ch211-195b11.3 | -0.038 |
| scinla | 0.086 | barx2 | -0.037 |
| mafba | 0.085 | krt92 | -0.037 |
| sox1a | 0.083 | egr1 | -0.037 |
| BX279523.3 | 0.082 | ephb3 | -0.037 |
| LO018106.2 | 0.082 | ackr3b | -0.037 |
| cx43 | 0.079 | tlcd1 | -0.036 |
| hapln1b | 0.078 | si:ch73-347e22.8 | -0.036 |
| dmbx1b | 0.077 | zgc:110333 | -0.036 |
| rassf10a | 0.076 | atp5if1a | -0.036 |
| cxcl14 | 0.076 | gstp1 | -0.036 |
| colgalt2 | 0.075 | smad7 | -0.035 |