| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| vsx1 | 0.173 | elavl3 | -0.086 |
| foxg1b | 0.147 | tmsb | -0.077 |
| calb2b | 0.140 | tubb5 | -0.076 |
| gnb3a | 0.140 | tmeff1b | -0.074 |
| nrn1lb | 0.136 | cd99l2 | -0.073 |
| rorb | 0.136 | elavl4 | -0.071 |
| si:dkey-16p21.8 | 0.131 | gap43 | -0.068 |
| mpp6b | 0.127 | nova1 | -0.068 |
| si:ch73-256g18.2 | 0.127 | si:ch73-386h18.1 | -0.068 |
| ppp1r1b | 0.123 | rtn1b | -0.067 |
| cabp2a | 0.122 | stmn2a | -0.063 |
| si:ch1073-83n3.2 | 0.120 | dpysl3 | -0.061 |
| gng13b | 0.119 | stmn1b | -0.061 |
| si:dkey-238o13.4 | 0.119 | sncb | -0.058 |
| LOC101886429 | 0.117 | adam22 | -0.056 |
| pcbp3 | 0.117 | tmsb2 | -0.056 |
| sept4a | 0.116 | snap25a | -0.055 |
| syt5b | 0.115 | zgc:65894 | -0.055 |
| stx3a | 0.114 | hmgb3a | -0.054 |
| nanog | 0.110 | adcyap1b | -0.053 |
| pcp4l1 | 0.110 | hapln1a | -0.053 |
| si:ch211-129p13.1 | 0.110 | mllt11 | -0.053 |
| RIC3 | 0.109 | pou3f3b | -0.053 |
| cplx4a | 0.107 | zfhx3 | -0.052 |
| h1m | 0.107 | gng2 | -0.051 |
| samsn1a | 0.106 | meis1b | -0.051 |
| rgs16 | 0.105 | nr2f1a | -0.051 |
| gnao1b | 0.103 | nrn1a | -0.051 |
| rs1a | 0.102 | aplp1 | -0.050 |
| ccna1 | 0.101 | icn2 | -0.050 |
| mid1ip1l | 0.101 | maptb | -0.050 |
| zgc:173742 | 0.101 | pbx3b | -0.050 |
| bhlhe23 | 0.100 | si:ch73-127m5.1 | -0.050 |
| BX663503.1 | 0.100 | tuba1c | -0.050 |
| prox1a | 0.100 | atcaya | -0.049 |