Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| uts2d | 0.128 | XLOC-003690 | -0.081 |
| chodl | 0.120 | id1 | -0.081 |
| CR377229.1 | 0.119 | mdka | -0.075 |
| sncb | 0.115 | her15.1 | -0.070 |
| tmem59l | 0.113 | cldn5a | -0.067 |
| rbfox1 | 0.107 | XLOC-003689 | -0.066 |
| gng3 | 0.107 | sox3 | -0.065 |
| gap43 | 0.107 | notch3 | -0.065 |
| cplx2l | 0.106 | sdc4 | -0.061 |
| LOC100536946 | 0.106 | hmgb2a | -0.060 |
| jagn1a | 0.105 | sparc | -0.059 |
| slc18a3a | 0.103 | COX7A2 (1 of many) | -0.058 |
| stx1b | 0.103 | XLOC-003692 | -0.058 |
| snap25a | 0.102 | msna | -0.057 |
| ywhag2 | 0.102 | si:ch73-281n10.2 | -0.057 |
| chrna5 | 0.102 | cd82a | -0.055 |
| gabrb4 | 0.102 | vamp3 | -0.055 |
| rtn1b | 0.102 | her4.2 | -0.055 |
| nsg2 | 0.101 | msi1 | -0.055 |
| syt2a | 0.101 | btg2 | -0.054 |
| nrn1a | 0.101 | her4.1 | -0.054 |
| slc16a3 | 0.100 | sb:cb81 | -0.053 |
| stxbp1a | 0.100 | fabp7a | -0.053 |
| si:dkey-153k10.9 | 0.100 | sox19a | -0.053 |
| cpe | 0.100 | zgc:56493 | -0.053 |
| si:dkey-280e21.3 | 0.099 | si:ch211-286b5.5 | -0.052 |
| CABZ01118738.1 | 0.099 | her12 | -0.052 |
| stmn3 | 0.098 | gpm6bb | -0.051 |
| id4 | 0.097 | tuba8l | -0.051 |
| atp6v0cb | 0.097 | rplp1 | -0.051 |
| stmn2b | 0.097 | lfng | -0.049 |
| adam22 | 0.096 | hmgb2b | -0.049 |
| stmn2a | 0.095 | gfap | -0.049 |
| onecut3a | 0.095 | abhd6a | -0.049 |
| stmn1b | 0.095 | sox2 | -0.049 |