Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| rtn1b | 0.094 | hmgb2b | -0.081 |
| slc17a6a | 0.089 | hmgb2a | -0.078 |
| gpm6ab | 0.089 | si:dkey-151g10.6 | -0.074 |
| scg2b | 0.086 | hmga1a | -0.070 |
| nsg2 | 0.085 | rplp1 | -0.067 |
| atp6v0cb | 0.085 | ran | -0.067 |
| gap43 | 0.084 | rps24 | -0.066 |
| sncb | 0.084 | rps12 | -0.066 |
| nrxn1a | 0.083 | rps28 | -0.065 |
| ywhag2 | 0.083 | rpl39 | -0.065 |
| stmn2a | 0.082 | rps27a | -0.065 |
| rtn1a | 0.081 | id1 | -0.064 |
| aplp1 | 0.080 | rps19 | -0.063 |
| gabrb4 | 0.080 | rps15a | -0.063 |
| map1aa | 0.079 | rpl11 | -0.063 |
| nrn1a | 0.079 | rpl35a | -0.063 |
| vamp2 | 0.077 | rplp2l | -0.062 |
| slc17a6b | 0.077 | pcna | -0.061 |
| pcsk1nl | 0.077 | stmn1a | -0.061 |
| gng3 | 0.076 | rpl29 | -0.061 |
| slc1a2b | 0.075 | rps20 | -0.060 |
| rnasekb | 0.075 | rpl8 | -0.060 |
| calm1a | 0.075 | h2afvb | -0.059 |
| ptprsb | 0.074 | rps3a | -0.059 |
| tmem59l | 0.074 | ranbp1 | -0.059 |
| stx1b | 0.074 | rpl7a | -0.059 |
| cpe | 0.074 | si:ch73-281n10.2 | -0.059 |
| stmn1b | 0.073 | rpl38 | -0.058 |
| atpv0e2 | 0.073 | rpl12 | -0.058 |
| tubb5 | 0.073 | rps13 | -0.058 |
| nell2b | 0.073 | rpl7 | -0.058 |
| zgc:65894 | 0.072 | msna | -0.058 |
| snap25a | 0.072 | rps11 | -0.057 |
| cadm4 | 0.072 | rpl26 | -0.057 |
| adcyap1b | 0.071 | rpl23 | -0.057 |