Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CABZ01075068.1 | 0.118 | stmn1b | -0.069 |
| cldn5a | 0.106 | ckbb | -0.064 |
| gfap | 0.099 | rtn1a | -0.058 |
| XLOC-003690 | 0.094 | gng3 | -0.058 |
| atf3 | 0.093 | gpm6ab | -0.058 |
| id1 | 0.093 | sncb | -0.055 |
| angptl4 | 0.089 | elavl3 | -0.053 |
| sdc4 | 0.088 | rtn1b | -0.052 |
| junba | 0.084 | gpm6aa | -0.052 |
| si:ch211-286o17.1 | 0.084 | elavl4 | -0.052 |
| zbtb16a | 0.083 | atp6v0cb | -0.051 |
| XLOC-003689 | 0.081 | ywhag2 | -0.049 |
| her9 | 0.080 | stmn2a | -0.048 |
| sox3 | 0.080 | rnasekb | -0.048 |
| fosab | 0.077 | pvalb1 | -0.048 |
| sox21a | 0.077 | vamp2 | -0.047 |
| mdka | 0.076 | stx1b | -0.047 |
| si:ch211-212k18.5 | 0.076 | fez1 | -0.047 |
| selenoh | 0.076 | si:dkeyp-75h12.5 | -0.047 |
| plp1a | 0.076 | pvalb2 | -0.046 |
| her2 | 0.076 | atp6v1e1b | -0.046 |
| zfp36l1a | 0.074 | hmgb1a | -0.046 |
| hoxa2b | 0.074 | gap43 | -0.046 |
| jdp2b | 0.073 | mllt11 | -0.045 |
| gas1b | 0.073 | zgc:65894 | -0.045 |
| zgc:56493 | 0.072 | stxbp1a | -0.045 |
| grasp | 0.071 | tmsb | -0.045 |
| sb:cb81 | 0.071 | tmsb2 | -0.044 |
| mapk12b | 0.070 | gapdhs | -0.043 |
| greb1 | 0.070 | snap25a | -0.043 |
| boc | 0.070 | atpv0e2 | -0.042 |
| egr2b | 0.070 | ywhah | -0.042 |
| XLOC-044191 | 0.069 | csdc2a | -0.042 |
| egfl6 | 0.068 | nsg2 | -0.042 |
| pax3a | 0.068 | olfm1b | -0.042 |