| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lmx1a | 0.279 | gpm6aa | -0.084 |
| wnt10b | 0.250 | CU467822.1 | -0.082 |
| bmp6 | 0.221 | CU634008.1 | -0.061 |
| rspo3 | 0.220 | mt-atp6 | -0.061 |
| cdon | 0.205 | slc1a2b | -0.060 |
| msx1b | 0.199 | CR848047.1 | -0.060 |
| adamtsl5 | 0.199 | fabp7a | -0.059 |
| zic2b | 0.198 | gapdhs | -0.055 |
| msx3 | 0.196 | mt-nd1 | -0.053 |
| ezra | 0.192 | zgc:165461 | -0.049 |
| col12a1a | 0.191 | ckbb | -0.048 |
| pmp22a | 0.186 | efhd1 | -0.046 |
| wnt1 | 0.185 | atp1a1b | -0.045 |
| col7a1l | 0.185 | nfia | -0.045 |
| gdf7 | 0.184 | cspg5a | -0.044 |
| crabp2a | 0.177 | acbd7 | -0.043 |
| gdf6a | 0.174 | lmo3 | -0.042 |
| slc1a3a | 0.161 | elavl4 | -0.042 |
| fabp11a | 0.161 | pvalb1 | -0.041 |
| wnt11r | 0.151 | her6 | -0.041 |
| cyp27c1 | 0.149 | sox19a | -0.041 |
| rspo2 | 0.141 | atp1b4 | -0.041 |
| fzd10 | 0.138 | mt-nd2 | -0.041 |
| loxl2a | 0.136 | chl1b | -0.041 |
| cdh6 | 0.136 | slc1a3b | -0.040 |
| wnt10a | 0.133 | ppap2d | -0.040 |
| hoxc1a | 0.131 | gpm6bb | -0.040 |
| lmx1bb | 0.130 | NPAS3 | -0.040 |
| olig3 | 0.125 | ntn1a | -0.039 |
| bcam | 0.124 | slc6a1b | -0.039 |
| meis1a | 0.124 | mid1ip1b | -0.039 |
| nog1 | 0.120 | cotl1 | -0.038 |
| zic5 | 0.119 | ptn | -0.038 |
| gdpd5a | 0.118 | pvalb2 | -0.038 |
| bmp4 | 0.116 | cspg5b | -0.038 |