Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tg | 0.435 | her9 | -0.040 |
| slc5a5 | 0.433 | marcksl1b | -0.039 |
| nkx2.4b | 0.368 | marcksb | -0.038 |
| si:ch211-165i18.2 | 0.362 | nucks1a | -0.036 |
| duox2 | 0.354 | cx43.4 | -0.035 |
| moxd1l | 0.347 | si:ch211-222l21.1 | -0.035 |
| gpha2 | 0.342 | apoeb | -0.034 |
| phex | 0.322 | glulb | -0.031 |
| MINAR1 | 0.292 | akap12b | -0.031 |
| si:dkey-77f5.10 | 0.284 | tmeff1b | -0.031 |
| ngb | 0.277 | hmgb3a | -0.030 |
| si:dkey-10h3.2 | 0.271 | si:ch211-137a8.4 | -0.030 |
| XLOC-034214 | 0.266 | zfp36l1a | -0.030 |
| tpo | 0.265 | ptbp1b | -0.029 |
| wisp1b | 0.255 | foxa2 | -0.029 |
| chst2b | 0.250 | srsf3a | -0.029 |
| cd59 | 0.248 | mki67 | -0.028 |
| LOC108179803 | 0.248 | rnd3a | -0.028 |
| si:dkey-151j17.4 | 0.243 | krt4 | -0.028 |
| nrn1b | 0.235 | si:ch211-114n24.6 | -0.028 |
| si:dkey-26g8.5 | 0.234 | brd3a | -0.028 |
| CR812470.1 | 0.230 | smarcd1 | -0.028 |
| rergla | 0.220 | ube2e1 | -0.028 |
| samsn1b | 0.217 | cdx4 | -0.027 |
| dclk1a | 0.210 | hnrnpa0a | -0.027 |
| cx30.3 | 0.209 | ackr3b | -0.027 |
| kcng2 | 0.209 | stm | -0.027 |
| crhbp | 0.209 | sf3b2 | -0.027 |
| pax8 | 0.207 | nusap1 | -0.027 |
| cep57l1 | 0.203 | dact2 | -0.027 |
| trpv6 | 0.196 | znf503 | -0.027 |
| ctxn2 | 0.193 | hnrnph1l | -0.027 |
| SLC46A3 (1 of many) | 0.193 | marcksa | -0.027 |
| zgc:172131 | 0.192 | NC-002333.4 | -0.027 |
| ncam1b | 0.188 | sept15 | -0.027 |