Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX294129.1 | 0.114 | ptmab | -0.037 |
| CU062431.1 | 0.105 | fabp7a | -0.025 |
| BX088709.1 | 0.100 | si:ch73-1a9.3 | -0.022 |
| CU550719.2 | 0.089 | h2afva | -0.022 |
| CT737184.1 | 0.086 | hmgn2 | -0.021 |
| LOC108183538 | 0.084 | ptmaa | -0.019 |
| LOC103908748 | 0.082 | hmgb1a | -0.019 |
| si:ch211-195h23.4 | 0.077 | hmgn6 | -0.019 |
| LOC101885809 | 0.077 | hmgb2a | -0.018 |
| BX511112.1 | 0.074 | insm1a | -0.018 |
| slc45a2 | 0.069 | foxg1b | -0.018 |
| cyp3c4 | 0.064 | hmga1a | -0.018 |
| gnmt | 0.064 | hdac1 | -0.018 |
| CR354549.6 | 0.063 | rhoab | -0.018 |
| aifm3 | 0.062 | hes6 | -0.017 |
| tyr | 0.061 | dlgap5 | -0.017 |
| tmem88b | 0.060 | hmgb1b | -0.017 |
| gadd45aa | 0.060 | hnrnpaba | -0.017 |
| oca2 | 0.059 | hmgb2b | -0.017 |
| pnp4a | 0.059 | tp53inp2 | -0.017 |
| pmela | 0.058 | epb41a | -0.016 |
| tspan36 | 0.058 | si:ch211-288g17.3 | -0.016 |
| dct | 0.058 | si:ch211-137a8.4 | -0.016 |
| agtrap | 0.057 | mex3b | -0.016 |
| si:ch73-18b11.2 | 0.056 | nono | -0.016 |
| si:ch211-175l6.1 | 0.056 | stmn1a | -0.015 |
| tyrp1b | 0.055 | cirbpb | -0.015 |
| tfec | 0.055 | pvalb2 | -0.015 |
| tek | 0.055 | sumo3a | -0.015 |
| pmelb | 0.054 | baz2ba | -0.015 |
| comtb | 0.054 | si:ch211-222l21.1 | -0.015 |
| slc24a5 | 0.053 | rrm1 | -0.014 |
| CR759846.1 | 0.053 | rorb | -0.014 |
| mitfa | 0.052 | npm1b | -0.014 |
| tyrp1a | 0.052 | FO082781.1 | -0.014 |