Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| scn4ab | 0.094 | nova2 | -0.022 |
| myf5 | 0.060 | CU467822.1 | -0.018 |
| msgn1 | 0.053 | gpm6aa | -0.018 |
| tbx6 | 0.053 | mdkb | -0.018 |
| her1 | 0.049 | msi1 | -0.018 |
| tcf15 | 0.047 | tuba1c | -0.018 |
| gpr17 | 0.046 | XLOC-003689 | -0.018 |
| tbx16l | 0.046 | XLOC-003692 | -0.018 |
| mcamb | 0.041 | her15.1 | -0.017 |
| ripply2 | 0.039 | sox3 | -0.016 |
| meox1 | 0.038 | tuba1a | -0.016 |
| dmrt2a | 0.037 | abhd6a | -0.016 |
| lpar1 | 0.037 | CU634008.1 | -0.016 |
| col4a1 | 0.036 | her4.2 | -0.016 |
| foxd3 | 0.034 | elavl3 | -0.015 |
| her7 | 0.034 | epb41a | -0.015 |
| ly6m5 | 0.034 | si:ch73-21g5.7 | -0.015 |
| socs3a | 0.033 | chd4a | -0.014 |
| mespaa | 0.032 | cldn5a | -0.014 |
| socs3b | 0.032 | gfap | -0.014 |
| tmem176 | 0.032 | her4.1 | -0.014 |
| tuba8l3 | 0.032 | LOC798783 | -0.014 |
| emp2 | 0.031 | myt1a | -0.014 |
| erbb3b | 0.031 | sox19a | -0.014 |
| foxc1a | 0.031 | XLOC-003690 | -0.014 |
| gfra1b | 0.031 | zgc:165461 | -0.014 |
| ngfrb | 0.031 | ckbb | -0.013 |
| pmp22a | 0.031 | dla | -0.013 |
| tgfbr2b | 0.031 | gadd45gb.1 | -0.013 |
| qkia | 0.030 | lrrn1 | -0.013 |
| scn1ba | 0.030 | mex3b | -0.013 |
| tm4sf18 | 0.030 | pax6a | -0.013 |
| BX001014.2 | 0.029 | si:ch73-386h18.1 | -0.013 |
| col4a2 | 0.029 | sox11b | -0.013 |
| CT030188.1 | 0.029 | dlb | -0.012 |