Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| irx5a | 0.052 | hbbe1.3 | -0.009 |
| irx3a | 0.045 | hbbe2 | -0.009 |
| irx1a | 0.026 | apoa2 | -0.008 |
| irx5b | 0.022 | cahz | -0.008 |
| sox21a | 0.022 | foxg1b | -0.008 |
| irx3b | 0.021 | hbae1.3 | -0.008 |
| mn1b | 0.021 | hbae3 | -0.008 |
| zbtb16a | 0.021 | hbbe1.1 | -0.008 |
| irx1b | 0.020 | hbbe1.2 | -0.008 |
| irx2a | 0.020 | hemgn | -0.008 |
| pax3a | 0.020 | pvalb1 | -0.008 |
| erfl1 | 0.019 | syt5b | -0.008 |
| cd99l2 | 0.018 | vsx1 | -0.008 |
| gas1b | 0.018 | alas2 | -0.007 |
| nova1 | 0.018 | apoa1b | -0.007 |
| pou3f3a | 0.018 | crx | -0.007 |
| CR751602.2 | 0.017 | epb41b | -0.007 |
| nat8l | 0.017 | hbae1.1 | -0.007 |
| nova2 | 0.017 | ndrg1b | -0.007 |
| onecut3a | 0.017 | nt5c2l1 | -0.007 |
| plp1a | 0.017 | plac8l1 | -0.007 |
| si:ch211-212k18.5 | 0.017 | pvalb2 | -0.007 |
| si:ch211-215d8.2 | 0.017 | rs1a | -0.007 |
| si:ch73-46j18.5 | 0.017 | si:ch211-250g4.3 | -0.007 |
| boc | 0.016 | slc4a1a | -0.007 |
| cxxc4 | 0.016 | tmod4 | -0.007 |
| dbx1a | 0.016 | zgc:163057 | -0.007 |
| en2b | 0.016 | actc1b | -0.006 |
| hmgb3a | 0.016 | add3b | -0.006 |
| lmo3 | 0.016 | apoc1 | -0.006 |
| otpa | 0.016 | atp2b1b | -0.006 |
| XLOC-003690 | 0.016 | blvrb | -0.006 |
| cldn5a | 0.015 | calb2b | -0.006 |
| fam168a | 0.015 | ckma | -0.006 |
| mex3b | 0.015 | crabp2b | -0.006 |