Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc16a9a | 0.679 | gstp1 | -0.114 |
| prop1 | 0.563 | ptmaa | -0.114 |
| ccdc3b | 0.509 | bik | -0.087 |
| foxf2b | 0.463 | txn | -0.083 |
| rbp5 | 0.436 | cldnh | -0.083 |
| adamts3 | 0.379 | tuba1c | -0.078 |
| colq | 0.375 | selenow1 | -0.077 |
| igfbp6b | 0.361 | cox7a2a | -0.075 |
| LHX3 | 0.361 | elavl3 | -0.074 |
| cyp27c1 | 0.355 | si:ch211-195b11.3 | -0.072 |
| si:ch211-119o8.4 | 0.354 | calb2a | -0.072 |
| lmx1a | 0.331 | selenow2b | -0.070 |
| nid2a | 0.324 | tspan2a | -0.070 |
| pitx3 | 0.323 | zgc:92380 | -0.070 |
| stra6 | 0.314 | wu:fb18f06 | -0.070 |
| zgc:114130 | 0.303 | pvalb5 | -0.068 |
| col4a1 | 0.301 | cmpk | -0.068 |
| hsd17b3 | 0.301 | TSTD1 | -0.066 |
| selp | 0.300 | adcyap1b | -0.066 |
| endouc | 0.297 | fthl31 | -0.065 |
| nanos1 | 0.294 | gbgt1l4 | -0.065 |
| afap1l2 | 0.282 | anxa5b | -0.064 |
| zgc:195023 | 0.271 | eml2 | -0.063 |
| prl | 0.270 | ube2v1 | -0.062 |
| six3b | 0.265 | zgc:165573 | -0.062 |
| LOC103911111 | 0.261 | stmn1b | -0.062 |
| si:dkey-9i23.8 | 0.259 | ponzr6 | -0.061 |
| rxfp3 | 0.257 | si:dkey-276j7.1 | -0.061 |
| zdhhc15a | 0.254 | bdnf | -0.061 |
| gnai2a | 0.253 | vsig8a | -0.060 |
| alp3 | 0.253 | gsnb | -0.060 |
| mia | 0.249 | ebf3a | -0.060 |
| pcdh2g3 | 0.243 | acbd7 | -0.060 |
| LOC103910269 | 0.242 | gng13b | -0.060 |
| slc4a2b | 0.236 | tspan35 | -0.059 |