Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cald1b | 0.070 | XLOC-003689 | -0.015 |
| spon2b | 0.060 | sox3 | -0.014 |
| barx1 | 0.058 | XLOC-003690 | -0.014 |
| CABZ01092746.1 | 0.055 | her15.1 | -0.013 |
| col6a4a | 0.055 | mcm7 | -0.012 |
| CU929237.1 | 0.053 | nop58 | -0.012 |
| col6a2 | 0.052 | npm1a | -0.012 |
| pmp22a | 0.051 | sox19a | -0.012 |
| ms4a17a.7 | 0.050 | XLOC-003692 | -0.012 |
| ms4a17a.9 | 0.050 | apex1 | -0.011 |
| sim2 | 0.050 | CABZ01075068.1 | -0.011 |
| gsc | 0.049 | cldn5a | -0.011 |
| dlx4a | 0.048 | dkc1 | -0.011 |
| mfap2 | 0.048 | her12 | -0.011 |
| sim2.1 | 0.047 | msi1 | -0.011 |
| osr1 | 0.046 | nop10 | -0.011 |
| ntn5 | 0.045 | nop56 | -0.011 |
| si:ch211-106h4.12 | 0.045 | sb:cb81 | -0.011 |
| col6a1 | 0.044 | slbp | -0.011 |
| rerglb | 0.044 | abhd6a | -0.011 |
| twist2 | 0.044 | cdca7a | -0.010 |
| asip2b | 0.043 | dla | -0.010 |
| phldb2a | 0.043 | epcam | -0.010 |
| rgs5a | 0.043 | gfap | -0.010 |
| col12a1a | 0.041 | her2 | -0.010 |
| meox2a | 0.041 | hmgb3b | -0.010 |
| serpinf1 | 0.041 | lfng | -0.010 |
| col5a1 | 0.041 | mcm3 | -0.010 |
| si:ch1073-291c23.2 | 0.041 | mcm5 | -0.010 |
| col6a3 | 0.040 | mcm6 | -0.010 |
| dcn | 0.040 | mrto4 | -0.010 |
| si:ch73-380l3.2 | 0.040 | nhp2 | -0.010 |
| ms4a17a.11 | 0.039 | nop16 | -0.010 |
| olfml3b | 0.039 | nop2 | -0.010 |
| tmem176 | 0.039 | notch1a | -0.010 |