Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sox3 | 0.065 | col1a2 | -0.014 |
| zgc:165461 | 0.063 | col1a1a | -0.013 |
| XLOC-003690 | 0.056 | col2a1b | -0.013 |
| cldn5a | 0.054 | pmp22a | -0.013 |
| notch3 | 0.051 | col1a1b | -0.012 |
| si:ch211-143l19.3 | 0.051 | krtt1c19e | -0.012 |
| XLOC-003689 | 0.051 | postnb | -0.012 |
| gpm6bb | 0.049 | si:dkey-16p21.8 | -0.012 |
| nrarpb | 0.049 | tuba8l2 | -0.012 |
| plp1a | 0.048 | bhmt | -0.012 |
| atp1b4 | 0.047 | ahnak | -0.011 |
| gfap | 0.047 | atp5if1b | -0.011 |
| her8a | 0.045 | fkbp7 | -0.011 |
| msi1 | 0.045 | krt8 | -0.011 |
| si:ch211-212k18.5 | 0.044 | lrrc17 | -0.011 |
| sox19a | 0.044 | twist1a | -0.011 |
| si:ch1073-303k11.2 | 0.043 | col5a1 | -0.011 |
| sox21a | 0.043 | csrp1a | -0.010 |
| her15.1 | 0.043 | efnb2a | -0.010 |
| atp1a1b | 0.042 | gpm6ab | -0.010 |
| her2 | 0.042 | mab21l1 | -0.010 |
| sox19b | 0.042 | pfn1 | -0.010 |
| CABZ01093502.1 | 0.041 | rbp4 | -0.010 |
| ptch2 | 0.040 | serpinh1b | -0.010 |
| robo4 | 0.040 | tfap2a | -0.010 |
| si:ch73-21g5.7 | 0.040 | tuba8l3 | -0.010 |
| cd82a | 0.039 | ywhaz | -0.010 |
| si:ch211-66e2.5 | 0.039 | si:dkey-261h17.1 | -0.010 |
| slc1a3b | 0.039 | apoc1 | -0.009 |
| sox1b | 0.039 | apoeb | -0.009 |
| sox2 | 0.039 | arpc1b | -0.009 |
| sp8b | 0.039 | bambia | -0.009 |
| sulf2a | 0.039 | cbfa2t3 | -0.009 |
| tmem47 | 0.039 | col12a1b | -0.009 |
| notch1b | 0.038 | col5a2a | -0.009 |