Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch211-143l19.3 | 0.080 | stmn1b | -0.029 |
| sox3 | 0.065 | gpm6ab | -0.029 |
| gfap | 0.060 | zc4h2 | -0.026 |
| zgc:165461 | 0.060 | rtn1a | -0.026 |
| sdc4 | 0.054 | gng3 | -0.025 |
| cldn5a | 0.054 | sncb | -0.025 |
| XLOC-003690 | 0.054 | ckbb | -0.024 |
| CU855688.1 | 0.053 | vamp2 | -0.024 |
| sfrp5 | 0.053 | elavl4 | -0.023 |
| cd82a | 0.053 | atp6v0cb | -0.023 |
| notch3 | 0.052 | tmem59l | -0.022 |
| si:dkey-58f10.13 | 0.052 | elavl3 | -0.022 |
| XLOC-003689 | 0.051 | calm1a | -0.022 |
| nrarpb | 0.050 | stx1b | -0.022 |
| tuba8l | 0.050 | fez1 | -0.022 |
| her8a | 0.047 | nrn1a | -0.021 |
| si:ch73-21g5.7 | 0.046 | rtn1b | -0.021 |
| rgmd | 0.045 | nsg2 | -0.021 |
| XLOC-025024 | 0.045 | mab21l1 | -0.021 |
| angptl4 | 0.044 | stxbp1a | -0.021 |
| fgfr2 | 0.044 | cdk5r1b | -0.021 |
| ptch2 | 0.044 | csdc2a | -0.021 |
| plp1a | 0.044 | atp6v1e1b | -0.020 |
| notch1b | 0.043 | rnasekb | -0.020 |
| her15.1 | 0.043 | ywhag2 | -0.020 |
| msi1 | 0.043 | ebf3a | -0.020 |
| ntn1a | 0.042 | olfm1b | -0.020 |
| gas1b | 0.042 | aplp1 | -0.020 |
| si:ch211-57n23.4 | 0.042 | id4 | -0.019 |
| COX7A2 (1 of many) | 0.042 | dpysl3 | -0.019 |
| her2 | 0.042 | adam22 | -0.019 |
| spdl1 | 0.042 | calm2a | -0.019 |
| robo4 | 0.042 | ndrg4 | -0.019 |
| CABZ01093502.1 | 0.042 | kdm6bb | -0.019 |
| lbr | 0.042 | pbx3b | -0.019 |