| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| alx1 | 0.241 | fgfbp2b | -0.124 |
| msx1b | 0.228 | barx1 | -0.088 |
| msx3 | 0.210 | matn1 | -0.088 |
| akap12b | 0.203 | col11a2 | -0.084 |
| BX324132.3 | 0.197 | si:ch211-156j16.1 | -0.084 |
| pitx2 | 0.193 | mia | -0.083 |
| krt18b | 0.192 | epyc | -0.079 |
| cdon | 0.184 | ecrg4a | -0.079 |
| lum | 0.184 | grem2b | -0.077 |
| fmoda | 0.170 | snorc | -0.077 |
| prrx1b | 0.169 | si:dkey-151g10.6 | -0.077 |
| lamc3 | 0.164 | ucmab | -0.074 |
| tpbga | 0.162 | hoxa2b | -0.074 |
| mfap2 | 0.161 | foxf2a | -0.073 |
| adma | 0.160 | mdkb | -0.073 |
| ca6 | 0.160 | wwp2 | -0.073 |
| ccdc80l2 | 0.158 | otos | -0.073 |
| plpp3 | 0.157 | acana | -0.071 |
| bhmt | 0.156 | dlx4b | -0.071 |
| vwa1 | 0.155 | wisp3 | -0.070 |
| alx4b | 0.153 | tnxba | -0.070 |
| csf1a | 0.153 | hoxb3a | -0.070 |
| gstt1a | 0.152 | dlx3b | -0.066 |
| postnb | 0.149 | dlx2a | -0.066 |
| pmp22a | 0.149 | foxl1 | -0.065 |
| zfhx3 | 0.148 | meis1a | -0.065 |
| cd248b | 0.148 | hpgd | -0.065 |
| zfhx4 | 0.146 | ptgdsa | -0.064 |
| dcn | 0.145 | vwde | -0.063 |
| rhoq | 0.144 | rpl39 | -0.063 |
| twist3 | 0.143 | nog3 | -0.063 |
| tpm4a | 0.142 | rpl38 | -0.063 |
| aebp1 | 0.142 | si:dkey-6n6.1 | -0.062 |
| six1a | 0.141 | her15.1 | -0.062 |
| csf1b | 0.139 | ptch2 | -0.061 |