Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.090 | gpm6aa | -0.029 |
| ccna1 | 0.089 | tuba1c | -0.028 |
| h1m | 0.087 | rnasekb | -0.027 |
| zgc:173742 | 0.085 | rtn1a | -0.027 |
| cldnd | 0.083 | atp6v0cb | -0.026 |
| si:dkey-68o6.5 | 0.082 | nova2 | -0.026 |
| zgc:113424 | 0.080 | gpm6ab | -0.025 |
| acp5a | 0.078 | hbbe1.3 | -0.025 |
| cth1 | 0.078 | stmn1b | -0.025 |
| zgc:100951 | 0.078 | gapdhs | -0.024 |
| zgc:77118 | 0.078 | hbae3 | -0.024 |
| avd | 0.077 | marcksl1a | -0.024 |
| si:dkeyp-114g9.1 | 0.077 | elavl3 | -0.023 |
| nnr | 0.076 | gng3 | -0.023 |
| pabpc1l | 0.076 | pvalb1 | -0.023 |
| mcm6l | 0.072 | calm1a | -0.023 |
| pabpn1l | 0.072 | atp6v1e1b | -0.022 |
| map1lc3c | 0.071 | hbae1.1 | -0.022 |
| si:ch211-173m16.2 | 0.071 | mdkb | -0.022 |
| asb11 | 0.069 | pvalb2 | -0.022 |
| pou5f3 | 0.069 | sncb | -0.022 |
| si:ch1073-80i24.3 | 0.069 | vamp2 | -0.022 |
| si:ch211-132b12.8 | 0.069 | atpv0e2 | -0.021 |
| si:dkey-228b2.6 | 0.069 | ckbb | -0.021 |
| zgc:56699 | 0.069 | elavl4 | -0.021 |
| h2af1al | 0.068 | hbbe1.1 | -0.021 |
| tmem144b | 0.068 | snap25a | -0.021 |
| ddx4 | 0.067 | ywhag2 | -0.021 |
| gdf3 | 0.066 | atp6v1g1 | -0.020 |
| gtf3ab | 0.065 | ccni | -0.020 |
| lsm14b | 0.065 | cspg5a | -0.020 |
| zp3c | 0.065 | fam168a | -0.020 |
| BX005461.1 | 0.064 | fez1 | -0.020 |
| s100a1 | 0.064 | olfm1b | -0.020 |
| zp3d.1 | 0.064 | stx1b | -0.020 |