| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax10 | 0.352 | hmgb2a | -0.177 |
| LOC101886114 | 0.308 | crx | -0.130 |
| slc32a1 | 0.296 | otx5 | -0.129 |
| meis2a | 0.295 | syt5b | -0.127 |
| tfap2e | 0.282 | neurod4 | -0.123 |
| slc6a1a | 0.282 | histh1l | -0.113 |
| meis2b | 0.276 | ndrg1b | -0.107 |
| stxbp1a | 0.275 | ddah2 | -0.105 |
| tfap2a | 0.275 | vsx1 | -0.105 |
| celf5a | 0.274 | neurod1 | -0.103 |
| syt1a | 0.263 | anp32e | -0.103 |
| mir181b-3 | 0.263 | rs1a | -0.102 |
| tfap2b | 0.254 | fabp7a | -0.099 |
| tkta | 0.251 | otx2b | -0.083 |
| stx1b | 0.248 | gnb3a | -0.083 |
| tfap2c | 0.248 | btg1 | -0.083 |
| gad2 | 0.247 | insm1a | -0.083 |
| sv2a | 0.246 | msi1 | -0.081 |
| mab21l1 | 0.239 | atp2b1b | -0.081 |
| olfm2a | 0.233 | sept4a | -0.080 |
| eno2 | 0.230 | samsn1a | -0.079 |
| fosl2 | 0.224 | stxbp1b | -0.078 |
| elavl3 | 0.224 | prdm1b | -0.077 |
| slc35g2b | 0.219 | XLOC-014477 | -0.076 |
| mir181b-1 | 0.219 | ppdpfa | -0.076 |
| dscama | 0.218 | im:7152348 | -0.075 |
| pbx1a | 0.216 | epb41a | -0.075 |
| elavl4 | 0.216 | gng13b | -0.073 |
| mn1b | 0.214 | tulp1a | -0.073 |
| cplx3b | 0.213 | nexn | -0.072 |
| ywhag2 | 0.208 | cplx4a | -0.072 |
| zmat4a | 0.207 | zbtb18 | -0.072 |
| atp1b3a | 0.204 | pde6gb | -0.071 |
| lrtm1 | 0.203 | hes6 | -0.071 |
| rnd3a | 0.202 | six7 | -0.071 |