| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nid2a | 0.440 | cldnh | -0.239 |
| six3b | 0.421 | ptmaa | -0.222 |
| prop1 | 0.417 | gstp1 | -0.217 |
| fgf8a | 0.397 | txn | -0.212 |
| lamb1a | 0.346 | gapdhs | -0.193 |
| her12 | 0.346 | anxa5b | -0.188 |
| slc16a9a | 0.337 | rnasekb | -0.181 |
| nanos1 | 0.333 | bik | -0.170 |
| XLOC-003690 | 0.304 | wu:fb18f06 | -0.170 |
| BX248331.2 | 0.303 | vamp2 | -0.165 |
| tpm4a | 0.302 | selenow2b | -0.164 |
| mdka | 0.293 | calm1b | -0.158 |
| hesx1 | 0.284 | gabarapa | -0.157 |
| pitx3 | 0.283 | rtn1a | -0.156 |
| LHX3 | 0.282 | pvalb5 | -0.155 |
| her8a | 0.281 | calm1a | -0.152 |
| fzd8a | 0.279 | tmem59 | -0.151 |
| cx43.4 | 0.279 | eml2 | -0.151 |
| gli2a | 0.277 | nfe2l2a | -0.149 |
| akap12b | 0.276 | tspan2a | -0.149 |
| id1 | 0.275 | TSTD1 | -0.145 |
| XLOC-003692 | 0.272 | calb2a | -0.145 |
| dag1 | 0.271 | si:ch211-153b23.5 | -0.144 |
| stra6 | 0.265 | tuba1c | -0.143 |
| ccdc3b | 0.264 | cox7a2a | -0.143 |
| sulf1 | 0.263 | chga | -0.143 |
| frem3 | 0.259 | atp6v0cb | -0.142 |
| pmp22a | 0.253 | atp6v1e1b | -0.141 |
| nr2f5 | 0.253 | si:dkeyp-75h12.5 | -0.140 |
| her6 | 0.253 | flrt1b | -0.140 |
| auts2b | 0.251 | tprg1 | -0.139 |
| her4.1 | 0.251 | gbgt1l4 | -0.137 |
| six3a | 0.250 | htatip2 | -0.137 |
| rbp5 | 0.248 | vsig8a | -0.136 |
| six4b | 0.245 | adcyap1b | -0.136 |