| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.145 | NC-002333.4 | -0.141 |
| mkrn4 | 0.137 | hmgb2a | -0.081 |
| cldnd | 0.137 | si:ch73-1a9.3 | -0.072 |
| npc2 | 0.133 | eef1a1l1 | -0.071 |
| ccna1 | 0.132 | hmgn6 | -0.069 |
| gtf2a1 | 0.129 | si:ch211-222l21.1 | -0.066 |
| si:dkey-68o6.5 | 0.126 | hspb1 | -0.065 |
| h2af1al | 0.126 | ncl | -0.064 |
| dnajc1 | 0.125 | sox2 | -0.063 |
| h1m | 0.124 | alcamb | -0.062 |
| rbm7 | 0.118 | ptmab | -0.062 |
| acp5a | 0.115 | si:ch211-152c2.3 | -0.062 |
| zgc:77118 | 0.115 | ybx1 | -0.061 |
| gdf3 | 0.115 | crabp2b | -0.055 |
| spink2.1 | 0.115 | rplp1 | -0.054 |
| tmed2 | 0.114 | hnrnpa0b | -0.052 |
| lamp2 | 0.113 | pkdccb | -0.051 |
| thoc2 | 0.112 | hmgn2 | -0.050 |
| pfn2 | 0.107 | rps5 | -0.050 |
| cth1 | 0.107 | marcksl1b | -0.049 |
| zfand5b | 0.107 | apoeb | -0.049 |
| map1lc3c | 0.107 | hmgb3a | -0.048 |
| epcam | 0.107 | naca | -0.048 |
| siva1 | 0.105 | rplp0 | -0.048 |
| blf | 0.105 | anp32e | -0.047 |
| ccna2 | 0.103 | rps2 | -0.047 |
| ccng1 | 0.102 | cdx4 | -0.047 |
| zgc:173742 | 0.102 | si:ch211-137a8.4 | -0.047 |
| desi2 | 0.101 | rpl27 | -0.045 |
| zgc:56676 | 0.100 | npm1a | -0.044 |
| cldng | 0.100 | apoc1 | -0.044 |
| avd | 0.099 | mt-co2 | -0.044 |
| oclna | 0.099 | pfkfb4b | -0.043 |
| tent4b | 0.099 | rpl15 | -0.043 |
| stk35l | 0.099 | rpl19 | -0.043 |