| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| crx | 0.220 | pax6b | -0.113 |
| otx5 | 0.178 | pax6a | -0.110 |
| neurod1 | 0.174 | elavl3 | -0.097 |
| gngt2a | 0.158 | tmsb4x | -0.088 |
| zgc:109965 | 0.155 | npm1a | -0.086 |
| tulp1a | 0.154 | ranbp1 | -0.085 |
| btg1 | 0.153 | id1 | -0.084 |
| si:ch73-28h20.1 | 0.144 | mir181b-3 | -0.084 |
| si:dkey-21o19.2 | 0.140 | dkc1 | -0.082 |
| ddah2 | 0.139 | rbfox2 | -0.082 |
| syt5b | 0.136 | hmx4 | -0.080 |
| opn6a | 0.135 | atp1b3a | -0.080 |
| atp2b1b | 0.134 | eif4ebp3l | -0.080 |
| XLOC-014477 | 0.133 | fabp11a | -0.080 |
| prdm1a | 0.133 | stxbp1a | -0.079 |
| samd7 | 0.132 | bzw1b | -0.078 |
| elovl4b | 0.131 | prps1a | -0.078 |
| tmx3a | 0.131 | sox2 | -0.077 |
| rs1a | 0.131 | atp1b1a | -0.077 |
| anp32e | 0.129 | aldob | -0.076 |
| ndrg1b | 0.129 | nop58 | -0.076 |
| prdm1b | 0.129 | nhp2 | -0.075 |
| arl3l1 | 0.129 | fbl | -0.073 |
| si:dkey-220f10.4 | 0.128 | her6 | -0.073 |
| rxrgb | 0.127 | syt1a | -0.073 |
| zgc:112294 | 0.126 | cnbpa | -0.073 |
| tmem244 | 0.122 | snu13b | -0.073 |
| ndrg1a | 0.122 | si:dkey-102m7.3 | -0.073 |
| cadm3 | 0.121 | tfap2a | -0.072 |
| arl13a | 0.117 | nop2 | -0.072 |
| rcvrn2 | 0.115 | zfp36l1a | -0.072 |
| dscamb | 0.114 | mcm6 | -0.071 |
| nr2f1b | 0.113 | ssb | -0.071 |
| msi1 | 0.112 | pprc1 | -0.071 |
| zgc:103625 | 0.112 | cdca7b | -0.071 |