Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ptgs1 | 0.060 | pvalb1 | -0.021 |
| sdr16c5a | 0.055 | ckbb | -0.020 |
| krt92 | 0.048 | gpm6aa | -0.020 |
| XLOC-001964 | 0.047 | tuba1c | -0.020 |
| dnase1l4.1 | 0.046 | pvalb2 | -0.019 |
| si:ch1073-155h21.1 | 0.046 | rtn1a | -0.019 |
| si:dkey-117n7.5 | 0.046 | nova2 | -0.018 |
| BX005254.3 | 0.045 | stmn1b | -0.018 |
| XLOC-027769 | 0.045 | elavl3 | -0.017 |
| XLOC-042222 | 0.045 | gpm6ab | -0.017 |
| col7a1l | 0.044 | hbae3 | -0.016 |
| insl5a | 0.043 | hbbe1.3 | -0.016 |
| si:ch211-218g23.6 | 0.043 | tmsb | -0.016 |
| tuba8l2 | 0.043 | tuba1a | -0.016 |
| BX927258.1 | 0.042 | actc1b | -0.015 |
| fermt1 | 0.042 | hbae1.1 | -0.015 |
| vcana | 0.042 | atp6v0cb | -0.014 |
| cdh1 | 0.041 | fabp7a | -0.014 |
| zgc:171775 | 0.041 | gng3 | -0.014 |
| cx44.2 | 0.040 | mdkb | -0.014 |
| LOC108180265 | 0.040 | rnasekb | -0.014 |
| mir205 | 0.040 | si:dkey-276j7.1 | -0.014 |
| myh9a | 0.040 | sncb | -0.014 |
| XLOC-001603 | 0.039 | epb41a | -0.013 |
| XLOC-010030 | 0.039 | fabp3 | -0.013 |
| cldn7b | 0.038 | fez1 | -0.013 |
| XLOC-039121 | 0.038 | hbbe1.1 | -0.013 |
| cdx4 | 0.037 | hmgb1b | -0.013 |
| BX469925.3 | 0.037 | myt1a | -0.013 |
| abracl | 0.036 | myt1b | -0.013 |
| apoeb | 0.036 | si:dkeyp-75h12.5 | -0.013 |
| cldni | 0.036 | tubb5 | -0.013 |
| XLOC-032526 | 0.036 | marcksl1a | -0.013 |
| pfn1 | 0.035 | cadm3 | -0.012 |
| tgm1l4 | 0.035 | celf2 | -0.012 |