Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CDHR1 (1 of many) | 0.076 | hmga1a | -0.040 |
| r3hdm1 | 0.072 | hmgb2a | -0.038 |
| eomesa | 0.072 | rplp2l | -0.031 |
| tbr1a | 0.068 | rplp1 | -0.030 |
| CR848025.2 | 0.064 | hmgb2b | -0.030 |
| stxbp1b | 0.057 | rps24 | -0.029 |
| ajap1 | 0.057 | rpl18a | -0.028 |
| mhc1lia | 0.056 | rpl7 | -0.028 |
| mef2cb | 0.053 | rpl26 | -0.028 |
| emx3 | 0.052 | rps6 | -0.028 |
| strbp | 0.050 | eef1a1l1 | -0.028 |
| tbr1b | 0.050 | pcna | -0.027 |
| camk2n1a | 0.049 | rps20 | -0.027 |
| spa17 | 0.049 | rpsa | -0.027 |
| slc17a6a | 0.048 | id1 | -0.027 |
| zgc:163073 | 0.047 | stmn1a | -0.027 |
| XLOC-004014 | 0.046 | tuba8l4 | -0.027 |
| mef2aa | 0.046 | XLOC-003690 | -0.026 |
| camk1db | 0.046 | ran | -0.026 |
| olfm1a | 0.045 | rplp0 | -0.026 |
| tmem163b | 0.045 | rpl5a | -0.026 |
| sncb | 0.045 | zgc:56493 | -0.026 |
| olfm1b | 0.045 | msna | -0.026 |
| ywhag2 | 0.045 | rps12 | -0.025 |
| fmn2a | 0.045 | sox3 | -0.025 |
| LO017848.1 | 0.044 | snrpf | -0.025 |
| cdc42ep3 | 0.043 | rpl7a | -0.025 |
| snap25b | 0.043 | XLOC-003689 | -0.025 |
| syt1a | 0.043 | rpl36a | -0.025 |
| calm3a | 0.042 | rrm1 | -0.025 |
| necab1 | 0.042 | rps9 | -0.025 |
| stmn2a | 0.042 | rpl27 | -0.025 |
| celf2 | 0.042 | rpl23 | -0.025 |
| calm1a | 0.041 | rpl4 | -0.024 |
| gng3 | 0.041 | rpl8 | -0.024 |