Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| r3hdm1 | 0.064 | aldob | -0.015 |
| tbr1a | 0.061 | eef1da | -0.014 |
| eomesa | 0.060 | epcam | -0.014 |
| CDHR1 (1 of many) | 0.048 | si:dkey-16p21.8 | -0.014 |
| slc17a6a | 0.047 | cast | -0.013 |
| tbr1b | 0.045 | ccng1 | -0.013 |
| ywhag2 | 0.042 | cfl1l | -0.013 |
| tmem163b | 0.041 | ucp2 | -0.013 |
| celf2 | 0.040 | wu:fb18f06 | -0.013 |
| sncb | 0.040 | anxa1a | -0.012 |
| ajap1 | 0.039 | capns1a | -0.012 |
| camk2n1a | 0.039 | cd9b | -0.012 |
| emx3 | 0.039 | f11r.1 | -0.012 |
| nrn1a | 0.039 | gstp1 | -0.012 |
| stmn2a | 0.039 | hdlbpa | -0.012 |
| elavl4 | 0.037 | pfn1 | -0.012 |
| gng3 | 0.037 | pycard | -0.012 |
| lhx9 | 0.037 | s100a10b | -0.012 |
| LO017848.1 | 0.037 | spint2 | -0.012 |
| map1aa | 0.037 | tuba8l2 | -0.012 |
| necab1 | 0.037 | zgc:162730 | -0.012 |
| syt9a | 0.037 | atp1b1a | -0.011 |
| myt1la | 0.036 | cd63 | -0.011 |
| olfm1a | 0.036 | cdh1 | -0.011 |
| sv2a | 0.036 | cebpd | -0.011 |
| zgc:65894 | 0.036 | cldnb | -0.011 |
| syt1a | 0.036 | cst14b.1 | -0.011 |
| spa17 | 0.035 | eno3 | -0.011 |
| kcnip1b | 0.034 | gsnb | -0.011 |
| khdrbs2 | 0.034 | icn | -0.011 |
| lrfn4b | 0.034 | krt5 | -0.011 |
| rprml | 0.034 | lye | -0.011 |
| tuba1c | 0.034 | mgst1.2 | -0.011 |
| zgc:153426 | 0.034 | mpzl2b | -0.011 |
| camk2d2 | 0.033 | npc2 | -0.011 |