Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tfap2d | 0.298 | syt5b | -0.052 |
| insm1a | 0.106 | id1 | -0.043 |
| zgc:158291 | 0.096 | otx5 | -0.041 |
| rbpms2b | 0.095 | rs1a | -0.041 |
| foxn4 | 0.094 | mcm2 | -0.037 |
| alcama | 0.093 | mcm4 | -0.036 |
| LOC100537384 | 0.091 | mcm3 | -0.036 |
| mex3b | 0.088 | mcm5 | -0.036 |
| tp53inp2 | 0.086 | c1qbp | -0.035 |
| hes2.1 | 0.085 | her6 | -0.035 |
| stmn1b | 0.082 | fen1 | -0.035 |
| mllt11 | 0.080 | mcm6 | -0.034 |
| enc3 | 0.080 | cdca7a | -0.034 |
| stmn2b | 0.080 | gnb3a | -0.034 |
| tubb5 | 0.080 | samsn1a | -0.034 |
| atoh7 | 0.078 | atp2b1b | -0.034 |
| tuba1c | 0.078 | crx | -0.034 |
| LOC103909568 | 0.078 | vsx2 | -0.034 |
| adcyap1b | 0.078 | sox2 | -0.033 |
| hes6 | 0.077 | npm1a | -0.033 |
| cdkn1ca | 0.077 | pcp4l1 | -0.033 |
| isl2b | 0.075 | rx2 | -0.032 |
| si:ch211-284f22.3 | 0.075 | bzw1b | -0.032 |
| tuba1a | 0.075 | atp1a1a.1 | -0.032 |
| satb1b | 0.074 | dnajc9 | -0.032 |
| LOC110438096 | 0.074 | hells | -0.032 |
| gap43 | 0.072 | chchd10 | -0.032 |
| si:dkey-280e21.3 | 0.071 | anp32e | -0.032 |
| mycla | 0.070 | calb2b | -0.032 |
| islr2 | 0.069 | sypb | -0.031 |
| tmsb | 0.069 | unga | -0.031 |
| sox11b | 0.068 | gins2 | -0.031 |
| onecut1 | 0.067 | lig1 | -0.031 |
| kif3cb | 0.067 | ccnd1 | -0.030 |
| mab21l1 | 0.067 | rpa2 | -0.030 |