Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbxta | 0.131 | cldnd | -0.115 |
| wu:fb97g03 | 0.126 | nanog | -0.114 |
| akap12b | 0.124 | zgc:113424 | -0.093 |
| wnt11f2 | 0.123 | spink2.1 | -0.092 |
| si:dkeyp-2e4.3 | 0.121 | ccna1 | -0.091 |
| hes6 | 0.116 | cldng | -0.091 |
| fscn1a | 0.113 | map1lc3c | -0.091 |
| ybx1 | 0.112 | mknk2a | -0.087 |
| stm | 0.109 | tent4b | -0.086 |
| im:7138239 | 0.105 | exd2 | -0.086 |
| ism1 | 0.104 | pabpn1l | -0.085 |
| cdx4 | 0.104 | btg4 | -0.083 |
| msgn1 | 0.103 | klhl18 | -0.082 |
| ncl | 0.100 | h2af1al | -0.082 |
| efnb2b | 0.099 | rbpms2b | -0.082 |
| mespab | 0.096 | cited4b | -0.081 |
| notum1a | 0.096 | gtf3ab | -0.080 |
| hmga1a | 0.092 | acp5a | -0.080 |
| gata5 | 0.092 | si:ch211-132b12.8 | -0.079 |
| BX927327.1 | 0.092 | stk35l | -0.078 |
| nradd | 0.091 | eloal | -0.078 |
| hspb1 | 0.090 | klhl20 | -0.078 |
| efnb2a | 0.090 | rab32a | -0.077 |
| si:ch73-1a9.3 | 0.089 | tent5c | -0.077 |
| cyp27c1 | 0.089 | ska2 | -0.077 |
| eef1a1l1 | 0.089 | tmem131 | -0.075 |
| hmgb2a | 0.088 | slc25a25a | -0.075 |
| eve1 | 0.088 | maco1a | -0.075 |
| si:ch211-222l21.1 | 0.088 | mid1ip1l | -0.075 |
| tpbga | 0.088 | cldn7b | -0.074 |
| flrt3 | 0.087 | mt2 | -0.074 |
| lhx1a | 0.086 | h1m | -0.074 |
| hnrnpa0b | 0.086 | mkrn4 | -0.073 |
| osr1 | 0.085 | si:ch211-11k18.4 | -0.073 |
| hmgn6 | 0.084 | ctss2.1 | -0.073 |