Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-015429 | 0.271 | calm1a | -0.071 |
| pou5f3 | 0.233 | si:ch1073-429i10.3.1 | -0.068 |
| si:ch1073-80i24.3 | 0.223 | ccni | -0.067 |
| nnr | 0.219 | gapdhs | -0.065 |
| polr3gla | 0.207 | gpm6aa | -0.064 |
| asb11 | 0.202 | rnasekb | -0.064 |
| s100a1 | 0.200 | tuba1c | -0.064 |
| si:dkeyp-114g9.1 | 0.199 | hbbe1.3 | -0.063 |
| zgc:56699 | 0.199 | atp6v0cb | -0.062 |
| si:dkey-68o6.5 | 0.191 | rtn1a | -0.062 |
| stm | 0.190 | hbae3 | -0.061 |
| lrwd1 | 0.186 | stmn1b | -0.059 |
| si:dkey-228b2.6 | 0.186 | atp6v1e1b | -0.058 |
| si:ch211-173m16.2 | 0.183 | atp6v1g1 | -0.058 |
| tbx16 | 0.180 | gng3 | -0.058 |
| h1m | 0.179 | krt4 | -0.058 |
| avd | 0.173 | hbae1.1 | -0.057 |
| nanog | 0.172 | pvalb1 | -0.057 |
| si:dkey-66i24.9 | 0.170 | cyt1 | -0.055 |
| ddx4 | 0.169 | gpm6ab | -0.055 |
| add3b | 0.168 | pvalb2 | -0.055 |
| vrtn | 0.165 | marcksl1a | -0.055 |
| si:ch211-152c2.3 | 0.163 | sncb | -0.054 |
| LOC100008030 | 0.160 | hbbe1.1 | -0.053 |
| LOC108190024 | 0.160 | vamp2 | -0.053 |
| BX005461.1 | 0.157 | atp6ap2 | -0.052 |
| foxh1 | 0.156 | elavl3 | -0.052 |
| zgc:77118 | 0.156 | ywhag2 | -0.052 |
| foxd5 | 0.155 | snap25a | -0.051 |
| si:ch211-226h8.14 | 0.154 | wu:fb55g09 | -0.051 |
| vox | 0.154 | atpv0e2 | -0.050 |
| zp3.2 | 0.154 | cyt1l | -0.050 |
| ccna1 | 0.153 | elavl4 | -0.050 |
| ved | 0.153 | gabarapl2 | -0.050 |
| hspb1 | 0.151 | nova2 | -0.050 |