| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax2b | 0.448 | id1 | -0.126 |
| pax2a | 0.433 | msna | -0.108 |
| scrt1a | 0.285 | cd81a | -0.104 |
| pax8 | 0.284 | cldn5a | -0.103 |
| otpb | 0.284 | XLOC-003690 | -0.101 |
| lhx1a | 0.279 | fosab | -0.099 |
| slc32a1 | 0.254 | vamp3 | -0.097 |
| scrt2 | 0.248 | hmgb2a | -0.096 |
| slc30a2 | 0.230 | stmn1a | -0.095 |
| lhx5 | 0.227 | si:ch73-281n10.2 | -0.095 |
| nhlh2 | 0.221 | tuba8l4 | -0.095 |
| en1b | 0.219 | cd82a | -0.092 |
| lhx1b | 0.212 | selenoh | -0.091 |
| bhlhe22 | 0.196 | fabp7a | -0.091 |
| slc6a5 | 0.194 | tubb4b | -0.088 |
| stap2a | 0.192 | sdc4 | -0.088 |
| cacna2d3 | 0.192 | dut | -0.087 |
| cbfa2t3 | 0.190 | pcna | -0.086 |
| elavl3 | 0.189 | sox3 | -0.085 |
| si:dkey-175g6.2 | 0.185 | msi1 | -0.085 |
| ube2ql1 | 0.184 | tuba8l | -0.084 |
| hoxb9a | 0.182 | ranbp1 | -0.083 |
| myt1b | 0.181 | mdka | -0.083 |
| thsd7aa | 0.174 | ccng1 | -0.081 |
| si:ch73-386h18.1 | 0.173 | her2 | -0.081 |
| jagn1a | 0.171 | anp32a | -0.081 |
| myt1a | 0.171 | anp32b | -0.080 |
| hoxa9a | 0.169 | rpa3 | -0.080 |
| ebf2 | 0.167 | si:ch73-265d7.2 | -0.080 |
| otpa | 0.166 | ccnd1 | -0.079 |
| gdf11 | 0.160 | notch3 | -0.079 |
| robo3 | 0.160 | COX7A2 (1 of many) | -0.079 |
| uncx | 0.158 | sox19a | -0.079 |
| epb41a | 0.155 | lbr | -0.078 |
| zswim5 | 0.155 | cnbpa | -0.078 |