Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cotl1 | 0.178 | marcksl1a | -0.126 |
| col11a1a | 0.176 | c1qtnf5 | -0.124 |
| LOC100538177 | 0.174 | mfap2 | -0.117 |
| plecb | 0.173 | bhmt | -0.114 |
| myh9a | 0.172 | fbln1 | -0.113 |
| pfn1 | 0.172 | hgd | -0.108 |
| krt5 | 0.169 | cd82a | -0.108 |
| tmsb1 | 0.166 | pmp22a | -0.107 |
| tmsb4x | 0.163 | nme2b.1 | -0.104 |
| krt4 | 0.162 | ttc36 | -0.104 |
| col5a3b | 0.162 | tmem119b | -0.101 |
| itgb4 | 0.162 | twist1a | -0.100 |
| cyt1 | 0.159 | cd81a | -0.098 |
| col28a2a | 0.159 | prrx1a | -0.098 |
| hcls1 | 0.158 | qdpra | -0.097 |
| itgb3a | 0.157 | msna | -0.096 |
| capgb | 0.157 | prrx1b | -0.095 |
| arhgef5 | 0.157 | hpdb | -0.095 |
| cavin1b | 0.156 | ptx3a | -0.095 |
| cfl1l | 0.154 | crabp2a | -0.094 |
| pleca | 0.153 | tspan7 | -0.093 |
| capns1a | 0.152 | pcbd1 | -0.092 |
| wu:fi04e12 | 0.152 | CABZ01074130.1 | -0.092 |
| krtt1c19e | 0.152 | mdh1aa | -0.091 |
| ahnak | 0.152 | fah | -0.090 |
| s100a10b | 0.152 | ntd5 | -0.090 |
| cldn1 | 0.151 | hoxa13b | -0.089 |
| actb1 | 0.151 | calr | -0.089 |
| col18a1a | 0.150 | cfl1 | -0.088 |
| krt91 | 0.150 | fthl27 | -0.088 |
| col17a1a | 0.147 | sod1 | -0.085 |
| ecrg4b | 0.145 | reck | -0.085 |
| aep1 | 0.145 | stox1 | -0.085 |
| postnb | 0.145 | tuba8l3 | -0.085 |
| ywhaz | 0.144 | slc16a10 | -0.084 |