Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| aep1 | 0.247 | eef1a1l1 | -0.187 |
| col1a1b | 0.245 | ran | -0.168 |
| col11a1a | 0.239 | hsp90ab1 | -0.162 |
| col1a1a | 0.238 | rplp0 | -0.161 |
| postnb | 0.237 | h3f3d | -0.155 |
| col1a2 | 0.231 | hnrnpa0l | -0.154 |
| col2a1b | 0.227 | cct2 | -0.151 |
| krtt1c19e | 0.226 | rpl10a | -0.150 |
| LOC100538177 | 0.220 | khdrbs1a | -0.150 |
| wu:fa03e10 | 0.214 | slc25a5 | -0.150 |
| col5a3b | 0.214 | rps23 | -0.146 |
| cavin1b | 0.213 | eif3ba | -0.145 |
| rbp4 | 0.211 | snrpd1 | -0.143 |
| krt5 | 0.207 | cct3 | -0.142 |
| si:ch211-39i22.1 | 0.206 | h2afva | -0.141 |
| col14a1b | 0.204 | fthl27 | -0.138 |
| itgb3a | 0.201 | rsl24d1 | -0.136 |
| lgals1l1 | 0.197 | rpl8 | -0.135 |
| cotl1 | 0.196 | btf3 | -0.134 |
| tmsb4x | 0.192 | naca | -0.134 |
| itgb1b.2 | 0.190 | rpl12 | -0.133 |
| si:dkey-16p21.8 | 0.187 | rbm8a | -0.133 |
| hcls1 | 0.185 | cirbpb | -0.133 |
| col5a1 | 0.185 | eif3ea | -0.133 |
| pfn1 | 0.184 | apex1 | -0.133 |
| itgav | 0.184 | krt18a.1 | -0.132 |
| VIT | 0.183 | rps20 | -0.132 |
| kera | 0.182 | hnrnpabb | -0.131 |
| itgb4 | 0.182 | hnrnpaba | -0.131 |
| sparc | 0.181 | eif3f | -0.131 |
| lamb4 | 0.179 | snrpf | -0.131 |
| s100a10b | 0.178 | rps15a | -0.130 |
| col17a1a | 0.178 | hmgb2b | -0.130 |
| plecb | 0.178 | rpl23 | -0.130 |
| krt91 | 0.174 | rps7 | -0.129 |